RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 SERPINA10Q9UK55 444 aa13.59□□□□□ -0.23
SPTLC3-202ENST00000431275 PCDHAC2Q9Y5I4 1007 aa13.59□□□□□ -0.23
SPTLC3-202ENST00000431275 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
SPTLC3-202ENST00000431275 ZAP70P43403 619 aa13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 CRKP46108 304 aa13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 TBC1D9Q6ZT07 1266 aa13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 MAST3O60307 1309 aa13.58□□□□□ -0.24
SPTLC3-202ENST00000431275 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 ANGEL2Q5VTE6 544 aaKnown RBP13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 GGA3Q9NZ52 723 aa13.57□□□□□ -0.24
SPTLC3-202ENST00000431275 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
SPTLC3-202ENST00000431275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
SPTLC3-202ENST00000431275 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
SPTLC3-202ENST00000431275 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
SPTLC3-202ENST00000431275 MYH13Q9UKX3 1938 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 MYO1BO43795 1136 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 ATP5JP18859 108 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 DZIP1Q86YF9 867 aaKnown RBP13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 BOLA2Q9H3K6 86 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 TDRD3Q9H7E2 651 aaKnown RBP13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 RAI14Q9P0K7 980 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 AOX1Q06278 1338 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 PITPNM2Q9BZ72 1349 aa13.55□□□□□ -0.24
SPTLC3-202ENST00000431275 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 TRAF5O00463 557 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 MECOMQ03112 1051 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 APOBEC3HQ6NTF7 200 aaKnown RBP13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 DLK2Q6UY11 383 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 SULF1Q8IWU6 871 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 DAGLAQ9Y4D2 1042 aa13.54□□□□□ -0.24
SPTLC3-202ENST00000431275 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 HSPA6P17066 643 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 APLP1P51693 650 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 DNAJC2Q99543 621 aaKnown RBP13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 HAUS7Q99871 368 aa13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
SPTLC3-202ENST00000431275 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.24
SPTLC3-202ENST00000431275 GOLIM4O00461 696 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 IGSF3O75054 1194 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 NEFLP07196 543 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 LDHCP07864 332 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 GSTO1P78417 241 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 NUCB1Q02818 461 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 LNPKQ9C0E8 428 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
SPTLC3-202ENST00000431275 MROH7-TTC4A0A0A0MT08 1334 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 GAKO14976 1311 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 TTC41PQ6P2S7 1318 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 SALL3Q9BXA9 1300 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 CST9Q5W186 159 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 CHD1LQ86WJ1 897 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 DEFB129Q9H1M3 183 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 PAG1Q9NWQ8 432 aa13.51□□□□□ -0.25
SPTLC3-202ENST00000431275 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 MX1P20591 662 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 CACNB3P54284 484 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 MAP3K12Q12852 859 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
SPTLC3-202ENST00000431275 ERC2O15083 957 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms