RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CLRN2A0PK11 232 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
HDAC6-207ENST00000430858 NOGQ13253 232 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 OS9Q13438 667 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-207ENST00000430858 TNFAIP1Q13829 316 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
HDAC6-207ENST00000430858 NOP58Q9Y2X3 529 aaKnown RBP12.12□□□□□ -0.47
HDAC6-207ENST00000430858 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HDAC6-207ENST00000430858 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
HDAC6-207ENST00000430858 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 ZDHHC15Q96MV8 337 aa12.11□□□□□ -0.47
HDAC6-207ENST00000430858 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
HDAC6-207ENST00000430858 AOC2O75106 756 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 LDHBP07195 334 aaKnown RBP12.1□□□□□ -0.47
HDAC6-207ENST00000430858 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-207ENST00000430858 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 AOX1Q06278 1338 aa12.1□□□□□ -0.47
HDAC6-207ENST00000430858 FAM155AB1AL88 458 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-207ENST00000430858 FOXN1O15353 648 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 SLC10A3P09131 477 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 PRDX5P30044 214 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 TNNI2P48788 182 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 RASA3Q14644 834 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
HDAC6-207ENST00000430858 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-207ENST00000430858 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
HDAC6-207ENST00000430858 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 PPP1R12BO60237 982 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-207ENST00000430858 HMMRO75330 724 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-207ENST00000430858 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-207ENST00000430858 MAP3K11Q16584 847 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 HSP90AB4PQ58FF6 505 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 FKBP1CQ5VVH2 108 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 SPTY2D1Q68D10 685 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-207ENST00000430858 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
HDAC6-207ENST00000430858 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 CA12O43570 354 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 PRKG1Q13976 671 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 NBPF12Q5TAG4 269 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-207ENST00000430858 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 RASAL3Q86YV0 1011 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
HDAC6-207ENST00000430858 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
HDAC6-207ENST00000430858 PCNTO95613 3336 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 DIXDC1Q155Q3 683 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 LDLRAD1Q5T700 205 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 FAM83AQ86UY5 434 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 DZIP1Q86YF9 867 aaKnown RBP12.06□□□□□ -0.48
HDAC6-207ENST00000430858 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-207ENST00000430858 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
HDAC6-207ENST00000430858 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 DBNDD2Q9BQY9 259 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
HDAC6-207ENST00000430858 MCAMP43121 646 aa12.05□□□□□ -0.48
HDAC6-207ENST00000430858 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
HDAC6-207ENST00000430858 CACNB3P54284 484 aa12.05□□□□□ -0.48
HDAC6-207ENST00000430858 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-207ENST00000430858 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-207ENST00000430858 ZNF512BQ96KM6 892 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-207ENST00000430858 TEPSINQ96N21 525 aa12.05□□□□□ -0.48
HDAC6-207ENST00000430858 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
HDAC6-207ENST00000430858 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
HDAC6-207ENST00000430858 SSC5DA1L4H1 1573 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms