RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 ANKRD45Q5TZF3 282 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
SMIM12-203ENST00000426886 AOX1Q06278 1338 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 CLRN2A0PK11 232 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
SMIM12-203ENST00000426886 ZAP70P43403 619 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 CRKP46108 304 aa15.34■□□□□ 0.05
SMIM12-203ENST00000426886 RWDD1Q9H446 243 aaPredicted RBP15.34■□□□□ 0.05
SMIM12-203ENST00000426886 ADM5C9JUS6 153 aa15.33■□□□□ 0.05
SMIM12-203ENST00000426886 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.05
SMIM12-203ENST00000426886 TSHZ3Q63HK5 1081 aa15.33■□□□□ 0.05
SMIM12-203ENST00000426886 ZC3H15Q8WU90 426 aaKnown RBP15.33■□□□□ 0.05
SMIM12-203ENST00000426886 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.04
SMIM12-203ENST00000426886 AAMPQ13685 434 aa15.33■□□□□ 0.04
SMIM12-203ENST00000426886 VEZTQ9HBM0 779 aa15.33■□□□□ 0.04
SMIM12-203ENST00000426886 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.04
SMIM12-203ENST00000426886 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
SMIM12-203ENST00000426886 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
SMIM12-203ENST00000426886 PSME4Q14997 1843 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 CDC37L1Q7L3B6 337 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
SMIM12-203ENST00000426886 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 TEKT1Q969V4 418 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
SMIM12-203ENST00000426886 BOLA2Q9H3K6 86 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 PGAP2Q9UHJ9 254 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
SMIM12-203ENST00000426886 CYP2E1P05181 493 aaPredicted RBP15.31■□□□□ 0.04
SMIM12-203ENST00000426886 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
SMIM12-203ENST00000426886 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
SMIM12-203ENST00000426886 CACNB3P54284 484 aa15.31■□□□□ 0.04
SMIM12-203ENST00000426886 ZGPATQ8N5A5 531 aaKnown RBP15.31■□□□□ 0.04
SMIM12-203ENST00000426886 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
SMIM12-203ENST00000426886 MYO1BO43795 1136 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
SMIM12-203ENST00000426886 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
SMIM12-203ENST00000426886 HSPA6P17066 643 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 MECOMQ03112 1051 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 GCC1Q96CN9 775 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
SMIM12-203ENST00000426886 SUGT1Q9Y2Z0 365 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 SALL1Q9NSC2 1324 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
SMIM12-203ENST00000426886 LNPKQ9C0E8 428 aa15.3■□□□□ 0.04
SMIM12-203ENST00000426886 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
SMIM12-203ENST00000426886 SPTY2D1Q68D10 685 aaPredicted RBP15.29■□□□□ 0.04
SMIM12-203ENST00000426886 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
SMIM12-203ENST00000426886 MAST3O60307 1309 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 GOLIM4O00461 696 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 CELF2O95319 508 aaKnown RBP15.29■□□□□ 0.04
SMIM12-203ENST00000426886 MMP14P50281 582 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 APLP1P51693 650 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
SMIM12-203ENST00000426886 MTMR14Q8NCE2 650 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 DAGLAQ9Y4D2 1042 aa15.29■□□□□ 0.04
SMIM12-203ENST00000426886 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
SMIM12-203ENST00000426886 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
SMIM12-203ENST00000426886 ZNF384Q8TF68 577 aa15.28■□□□□ 0.04
SMIM12-203ENST00000426886 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
SMIM12-203ENST00000426886 HHIPL2Q6UWX4 724 aa15.28■□□□□ 0.04
SMIM12-203ENST00000426886 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
SMIM12-203ENST00000426886 ADAMTSL1Q8N6G6 1762 aa15.27■□□□□ 0.04
SMIM12-203ENST00000426886 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.04
SMIM12-203ENST00000426886 HDLBPQ00341 1268 aaKnown RBP15.27■□□□□ 0.04
SMIM12-203ENST00000426886 CST9Q5W186 159 aa15.27■□□□□ 0.04
SMIM12-203ENST00000426886 NSUN4Q96CB9 384 aaKnown RBP15.27■□□□□ 0.04
SMIM12-203ENST00000426886 DEFB129Q9H1M3 183 aa15.27■□□□□ 0.04
SMIM12-203ENST00000426886 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.03
SMIM12-203ENST00000426886 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.03
SMIM12-203ENST00000426886 PRKG1Q13976 671 aa15.27■□□□□ 0.03
SMIM12-203ENST00000426886 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.03
SMIM12-203ENST00000426886 MYH13Q9UKX3 1938 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 ATP5JP18859 108 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 SMC5Q8IY18 1101 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
SMIM12-203ENST00000426886 NEFLP07196 543 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 NAA16Q6N069 864 aaPredicted RBP15.26■□□□□ 0.03
SMIM12-203ENST00000426886 CDCA5Q96FF9 252 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 MRIQ9BWK5 157 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
SMIM12-203ENST00000426886 FZD1Q9UP38 647 aa15.26■□□□□ 0.03
SMIM12-203ENST00000426886 TMEM88BA6NKF7 163 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 TCP10Q12799 353 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 RASA3Q14644 834 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
SMIM12-203ENST00000426886 GPATCH3Q96I76 525 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 BTDP43251 543 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 PAG1Q9NWQ8 432 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 PITPNM2Q9BZ72 1349 aa15.25■□□□□ 0.03
SMIM12-203ENST00000426886 ZBTB22O15209 634 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms