RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 CERS5Q8N5B7 392 aa29.24■■■□□ 2.27
APOE-202ENST00000425718 GTF3C3Q9Y5Q9 886 aa29.24■■■□□ 2.27
APOE-202ENST00000425718 GOLIM4O00461 696 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 LDHCP07864 332 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 YY1P25490 414 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 PDE4AP27815 886 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 SCNN1DP51172 638 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 ZNF280AP59817 542 aaPredicted RBP29.23■■■□□ 2.27
APOE-202ENST00000425718 ZSCAN25Q6NSZ9 544 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 SERPINA10Q9UK55 444 aa29.23■■■□□ 2.27
APOE-202ENST00000425718 VEGFAP15692 232 aaPredicted RBP29.22■■■□□ 2.27
APOE-202ENST00000425718 MICALL2Q8IY33 904 aa29.22■■■□□ 2.27
APOE-202ENST00000425718 RAI14Q9P0K7 980 aa29.22■■■□□ 2.27
APOE-202ENST00000425718 ECM29Q5VYK3 1845 aa29.22■■■□□ 2.27
APOE-202ENST00000425718 TSHZ3Q63HK5 1081 aa29.21■■■□□ 2.27
APOE-202ENST00000425718 CNTROBQ8N137 903 aa29.21■■■□□ 2.27
APOE-202ENST00000425718 EVI5LQ96CN4 794 aa29.21■■■□□ 2.27
APOE-202ENST00000425718 MXD3Q9BW11 206 aa29.21■■■□□ 2.27
APOE-202ENST00000425718 ADARB2Q9NS39 739 aaKnown RBP29.21■■■□□ 2.27
APOE-202ENST00000425718 PRDX5P30044 214 aa29.2■■■□□ 2.26
APOE-202ENST00000425718 HHIPL2Q6UWX4 724 aa29.2■■■□□ 2.26
APOE-202ENST00000425718 TEKT1Q969V4 418 aa29.2■■■□□ 2.26
APOE-202ENST00000425718 F8W031 263 aaPredicted RBP29.19■■■□□ 2.26
APOE-202ENST00000425718 IDH1O75874 414 aaKnown RBP29.19■■■□□ 2.26
APOE-202ENST00000425718 PNMA8AQ86V59 439 aaPredicted RBP29.19■■■□□ 2.26
APOE-202ENST00000425718 KBTBD3Q8NAB2 608 aa29.19■■■□□ 2.26
APOE-202ENST00000425718 MTMR14Q8NCE2 650 aa29.19■■■□□ 2.26
APOE-202ENST00000425718 ZFYP08048 801 aaPredicted RBP29.18■■■□□ 2.26
APOE-202ENST00000425718 TBC1D9Q6ZT07 1266 aa29.18■■■□□ 2.26
APOE-202ENST00000425718 USP50Q70EL3 339 aaPredicted RBP29.18■■■□□ 2.26
APOE-202ENST00000425718 CERS3Q8IU89 383 aa29.18■■■□□ 2.26
APOE-202ENST00000425718 GPBP1L1Q9HC44 474 aaPredicted RBP29.18■■■□□ 2.26
APOE-202ENST00000425718 TTC22Q5TAA0 569 aa29.17■■■□□ 2.26
APOE-202ENST00000425718 NAA16Q6N069 864 aaPredicted RBP29.17■■■□□ 2.26
APOE-202ENST00000425718 MYOZ2Q9NPC6 264 aa29.17■■■□□ 2.26
APOE-202ENST00000425718 PIH1D3Q9NQM4 214 aaKnown RBP29.17■■■□□ 2.26
APOE-202ENST00000425718 RFX7Q2KHR2 1363 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 TRIM6-TRIM34B2RNG4 842 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 EPHX2P34913 555 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 MECOMQ03112 1051 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 DLGAP5Q15398 846 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 NSUN4Q96CB9 384 aaKnown RBP29.16■■■□□ 2.26
APOE-202ENST00000425718 FAM163AQ96GL9 167 aaPredicted RBP29.16■■■□□ 2.26
APOE-202ENST00000425718 NOL10Q9BSC4 688 aaKnown RBP29.16■■■□□ 2.26
APOE-202ENST00000425718 ANTXR1Q9H6X2 564 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 NDUFB9Q9Y6M9 179 aa29.16■■■□□ 2.26
APOE-202ENST00000425718 MYO1BO43795 1136 aa29.15■■■□□ 2.26
APOE-202ENST00000425718 CRKP46108 304 aa29.15■■■□□ 2.26
APOE-202ENST00000425718 RBM5P52756 815 aaKnown RBP eCLIP29.15■■■□□ 2.26
APOE-202ENST00000425718 MAP4K4O95819 1239 aaPredicted RBP29.14■■■□□ 2.26
APOE-202ENST00000425718 EPS15P42566 896 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 KIF4BQ2VIQ3 1234 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 CFAP100Q494V2 611 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 ZDHHC15Q96MV8 337 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 FSD1Q9BTV5 496 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 TAF1DQ9H5J8 278 aaPredicted RBP29.14■■■□□ 2.26
APOE-202ENST00000425718 RRAGCQ9HB90 399 aa29.14■■■□□ 2.26
APOE-202ENST00000425718 RGS3P49796 1198 aa29.13■■■□□ 2.25
APOE-202ENST00000425718 HIP1O00291 1037 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 BAG3O95817 575 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 GRIK5Q16478 980 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 SLC9C2Q5TAH2 1124 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 ZNF526Q8TF50 670 aaPredicted RBP29.12■■■□□ 2.25
APOE-202ENST00000425718 MROH7-TTC4A0A0A0MT08 1334 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 GAKO14976 1311 aa29.12■■■□□ 2.25
APOE-202ENST00000425718 PLCG2P16885 1265 aa29.11■■■□□ 2.25
APOE-202ENST00000425718 UBE3CQ15386 1083 aa29.11■■■□□ 2.25
APOE-202ENST00000425718 MAGEB6Q8N7X4 407 aa29.11■■■□□ 2.25
APOE-202ENST00000425718 ZC3H15Q8WU90 426 aaKnown RBP29.11■■■□□ 2.25
APOE-202ENST00000425718 RILPL2Q969X0 211 aa29.11■■■□□ 2.25
APOE-202ENST00000425718 EDC3Q96F86 508 aaKnown RBP29.11■■■□□ 2.25
APOE-202ENST00000425718 SPDYE2BA6NHP3 402 aa29.1■■■□□ 2.25
APOE-202ENST00000425718 POTECB2RU33 542 aa29.1■■■□□ 2.25
APOE-202ENST00000425718 SPDYE6P0CI01 402 aa29.1■■■□□ 2.25
APOE-202ENST00000425718 PDE6AP16499 860 aa29.1■■■□□ 2.25
APOE-202ENST00000425718 CYP7A1P22680 504 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 ADD2P35612 726 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 TBC1D10BQ4KMP7 808 aaPredicted RBP29.09■■■□□ 2.25
APOE-202ENST00000425718 BMP2KLQ5H9B9 411 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 SAMD7Q7Z3H4 446 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 TMOD2Q9NZR1 351 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 DAGLAQ9Y4D2 1042 aa29.09■■■□□ 2.25
APOE-202ENST00000425718 RNF113AO15541 343 aaKnown RBP29.08■■■□□ 2.25
APOE-202ENST00000425718 DIXDC1Q155Q3 683 aa29.08■■■□□ 2.25
APOE-202ENST00000425718 ZBED3Q96IU2 234 aaPredicted RBP29.08■■■□□ 2.25
APOE-202ENST00000425718 NMRK2Q9NPI5 230 aa29.08■■■□□ 2.25
APOE-202ENST00000425718 POLR2AP24928 1970 aaKnown RBP29.08■■■□□ 2.25
APOE-202ENST00000425718 GPR75-ASB3A0A0A6YYF3 556 aa29.07■■■□□ 2.24
APOE-202ENST00000425718 WNT10BO00744 389 aa29.07■■■□□ 2.24
APOE-202ENST00000425718 RBM26Q5T8P6 1007 aaKnown RBP29.07■■■□□ 2.24
APOE-202ENST00000425718 ADAMTSL1Q8N6G6 1762 aa29.06■■■□□ 2.24
APOE-202ENST00000425718 PITPNM2Q9BZ72 1349 aa29.06■■■□□ 2.24
APOE-202ENST00000425718 ZNF532Q9HCE3 1301 aa29.06■■■□□ 2.24
APOE-202ENST00000425718 SHTN1A0MZ66 631 aa29.06■■■□□ 2.24
APOE-202ENST00000425718 GSPT1P15170 499 aaKnown RBP29.05■■■□□ 2.24
APOE-202ENST00000425718 PPP4CP60510 307 aa29.05■■■□□ 2.24
APOE-202ENST00000425718 EAPPQ56P03 285 aaPredicted RBP29.05■■■□□ 2.24
APOE-202ENST00000425718 LDHDQ86WU2 507 aa29.05■■■□□ 2.24
APOE-202ENST00000425718 TRPM4Q8TD43 1214 aa29.05■■■□□ 2.24
APOE-202ENST00000425718 APPBP2Q92624 585 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms