RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 CCDC102AQ96A19 550 aa22.83■■□□□ 1.25
MSH5-207ENST00000425703 CHMP4BQ9H444 224 aaKnown RBP22.83■■□□□ 1.25
MSH5-207ENST00000425703 C1orf115Q9H7X2 142 aa22.83■■□□□ 1.25
MSH5-207ENST00000425703 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.25
MSH5-207ENST00000425703 SCAF8Q9UPN6 1271 aaKnown RBP22.83■■□□□ 1.25
MSH5-207ENST00000425703 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
MSH5-207ENST00000425703 ADORA1P30542 326 aa22.82■■□□□ 1.24
MSH5-207ENST00000425703 TNFAIP1Q13829 316 aa22.82■■□□□ 1.24
MSH5-207ENST00000425703 AIDAQ96BJ3 306 aa22.82■■□□□ 1.24
MSH5-207ENST00000425703 XAGE2Q96GT9 111 aa22.82■■□□□ 1.24
MSH5-207ENST00000425703 GPR108Q9NPR9 543 aa22.82■■□□□ 1.24
MSH5-207ENST00000425703 PAPPA2Q9BXP8 1791 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 CLRN2A0PK11 232 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 GRM1Q13255 1194 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 PRAMEF18Q5VWM3 479 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 CEP85Q6P2H3 762 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 HHIPL2Q6UWX4 724 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.81■■□□□ 1.24
MSH5-207ENST00000425703 ZDHHC15Q96MV8 337 aa22.81■■□□□ 1.24
MSH5-207ENST00000425703 PDE3AQ14432 1141 aa22.8■■□□□ 1.24
MSH5-207ENST00000425703 ZGPATQ8N5A5 531 aaKnown RBP22.8■■□□□ 1.24
MSH5-207ENST00000425703 VEZTQ9HBM0 779 aa22.8■■□□□ 1.24
MSH5-207ENST00000425703 ZNF70Q9UC06 446 aaPredicted RBP22.8■■□□□ 1.24
MSH5-207ENST00000425703 AOX1Q06278 1338 aa22.8■■□□□ 1.24
MSH5-207ENST00000425703 FAM155AB1AL88 458 aaPredicted RBP22.79■■□□□ 1.24
MSH5-207ENST00000425703 AOC2O75106 756 aa22.79■■□□□ 1.24
MSH5-207ENST00000425703 SURF6O75683 361 aaKnown RBP22.79■■□□□ 1.24
MSH5-207ENST00000425703 ZNF157P51786 506 aaPredicted RBP22.79■■□□□ 1.24
MSH5-207ENST00000425703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.79■■□□□ 1.24
MSH5-207ENST00000425703 OS9Q13438 667 aaPredicted RBP22.78■■□□□ 1.24
MSH5-207ENST00000425703 RASGRF1Q13972 1273 aa22.78■■□□□ 1.24
MSH5-207ENST00000425703 SUPT20HL1Q3ZLR7 823 aa22.78■■□□□ 1.24
MSH5-207ENST00000425703 NEUROD6Q96NK8 337 aa22.78■■□□□ 1.24
MSH5-207ENST00000425703 TDRD3Q9H7E2 651 aaKnown RBP22.78■■□□□ 1.24
MSH5-207ENST00000425703 ZBTB40Q9NUA8 1239 aa22.78■■□□□ 1.24
MSH5-207ENST00000425703 ECM29Q5VYK3 1845 aa22.78■■□□□ 1.24
MSH5-207ENST00000425703 FOXN1O15353 648 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
MSH5-207ENST00000425703 SLC10A3P09131 477 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 CTCFP49711 727 aaPredicted RBP22.77■■□□□ 1.24
MSH5-207ENST00000425703 RASA3Q14644 834 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 ARMC9Q7Z3E5 817 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
MSH5-207ENST00000425703 PRDX5P30044 214 aa22.76■■□□□ 1.23
MSH5-207ENST00000425703 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
MSH5-207ENST00000425703 GORABQ5T7V8 394 aa22.76■■□□□ 1.23
MSH5-207ENST00000425703 FKBP1CQ5VVH2 108 aa22.76■■□□□ 1.23
MSH5-207ENST00000425703 APOBEC3HQ6NTF7 200 aaKnown RBP22.76■■□□□ 1.23
MSH5-207ENST00000425703 RPAP2Q8IXW5 612 aaPredicted RBP22.76■■□□□ 1.23
MSH5-207ENST00000425703 UNCXA6NJT0 531 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 CA12O43570 354 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
MSH5-207ENST00000425703 ARID4AP29374 1257 aaPredicted RBP22.75■■□□□ 1.23
MSH5-207ENST00000425703 TNNI2P48788 182 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 MAP3K11Q16584 847 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 TNNI3KQ59H18 835 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 FPGT-TNNI3KV9GXZ4 949 aa22.75■■□□□ 1.23
MSH5-207ENST00000425703 UBE2Q2LH0YL09 131 aa22.74■■□□□ 1.23
MSH5-207ENST00000425703 LDLRAD1Q5T700 205 aa22.74■■□□□ 1.23
MSH5-207ENST00000425703 SPTY2D1Q68D10 685 aaPredicted RBP22.74■■□□□ 1.23
MSH5-207ENST00000425703 MOB2Q70IA6 237 aa22.74■■□□□ 1.23
MSH5-207ENST00000425703 RASAL3Q86YV0 1011 aa22.74■■□□□ 1.23
MSH5-207ENST00000425703 REM2Q8IYK8 340 aaPredicted RBP22.74■■□□□ 1.23
MSH5-207ENST00000425703 TMOD2Q9NZR1 351 aa22.74■■□□□ 1.23
MSH5-207ENST00000425703 UQCRFS1P1P0C7P4 283 aa22.73■■□□□ 1.23
MSH5-207ENST00000425703 HSP90AB4PQ58FF6 505 aa22.73■■□□□ 1.23
MSH5-207ENST00000425703 ERC1Q8IUD2 1116 aa22.73■■□□□ 1.23
MSH5-207ENST00000425703 PRDM10Q9NQV6 1147 aa22.73■■□□□ 1.23
MSH5-207ENST00000425703 MYH13Q9UKX3 1938 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 SSC5DA1L4H1 1573 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 HMMRO75330 724 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 NBPF12Q5TAG4 269 aaPredicted RBP22.72■■□□□ 1.23
MSH5-207ENST00000425703 FAM83AQ86UY5 434 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 SPATA5Q8NB90 893 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 ZNF512BQ96KM6 892 aaPredicted RBP22.72■■□□□ 1.23
MSH5-207ENST00000425703 HMG20BQ9P0W2 317 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 DAGLAQ9Y4D2 1042 aa22.72■■□□□ 1.23
MSH5-207ENST00000425703 TCP10L2B9ZVM9 353 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 KIF23Q02241 960 aaPredicted RBP22.71■■□□□ 1.23
MSH5-207ENST00000425703 DIXDC1Q155Q3 683 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 CCDC158Q5M9N0 1113 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 SLF2Q8IX21 1173 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 TEPSINQ96N21 525 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 ZIC5Q96T25 663 aa22.71■■□□□ 1.23
MSH5-207ENST00000425703 ANGEL1Q9UNK9 670 aaKnown RBP22.71■■□□□ 1.23
MSH5-207ENST00000425703 COL13A1Q5TAT6 717 aaPredicted RBP22.7■■□□□ 1.22
MSH5-207ENST00000425703 C20orf194Q5TEA3 1177 aa22.7■■□□□ 1.22
MSH5-207ENST00000425703 FAM163AQ96GL9 167 aaPredicted RBP22.7■■□□□ 1.22
MSH5-207ENST00000425703 ABCF2Q9UG63 623 aa22.7■■□□□ 1.22
MSH5-207ENST00000425703 GAKO14976 1311 aa22.69■■□□□ 1.22
MSH5-207ENST00000425703 HSPA8P11142 646 aaKnown RBP22.69■■□□□ 1.22
MSH5-207ENST00000425703 IREB2P48200 963 aaKnown RBP22.69■■□□□ 1.22
MSH5-207ENST00000425703 PRKG1Q13976 671 aa22.69■■□□□ 1.22
MSH5-207ENST00000425703 DBNDD2Q9BQY9 259 aa22.69■■□□□ 1.22
MSH5-207ENST00000425703 TMEM39BQ9GZU3 492 aa22.69■■□□□ 1.22
MSH5-207ENST00000425703 RPAP1Q9BWH6 1393 aaPredicted RBP22.68■■□□□ 1.22
MSH5-207ENST00000425703 IGSF3O75054 1194 aa22.68■■□□□ 1.22
MSH5-207ENST00000425703 MCAMP43121 646 aa22.68■■□□□ 1.22
MSH5-207ENST00000425703 ERICH6Q7L0X2 663 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 522 ms