RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 CCDC171Q6TFL3 1326 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 UBR2Q8IWV8 1755 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
LSM8-204ENST00000424702 VEZTQ9HBM0 779 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 CWC22Q9HCG8 908 aaKnown RBP8.57□□□□□ -1.04
LSM8-204ENST00000424702 NDUFB9Q9Y6M9 179 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 KIAA2012Q0VF49 1180 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 DCAF15Q66K64 600 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 MAGEB6Q8N7X4 407 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 FAM227BQ96M60 508 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 DBNDD1Q9H9R9 158 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 SMC3Q9UQE7 1217 aa8.57□□□□□ -1.04
LSM8-204ENST00000424702 TJP1Q07157 1748 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 RGPD3A6NKT7 1758 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 PHKA1P46020 1223 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 BCAMP50895 628 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 ATG9AQ7Z3C6 839 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 RGPD4Q7Z3J3 1758 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 DCPSQ96C86 337 aaKnown RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 RFX7Q2KHR2 1363 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 NPM3O75607 178 aaKnown RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 STRIP1Q5VSL9 837 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 ZNF277Q9NRM2 450 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 NT5C2P49902 561 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 AOC3Q16853 763 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 SULF1Q8IWU6 871 aa8.56□□□□□ -1.04
LSM8-204ENST00000424702 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 ZSCAN31Q96LW9 406 aaPredicted RBP8.56□□□□□ -1.04
LSM8-204ENST00000424702 VIRMAQ69YN4 1812 aaKnown RBP8.55□□□□□ -1.04
LSM8-204ENST00000424702 SALL3Q9BXA9 1300 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
LSM8-204ENST00000424702 USP17L8P0C7I0 530 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 ADORA1P30542 326 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
LSM8-204ENST00000424702 C15orf52Q6ZUT6 534 aaKnown RBP8.55□□□□□ -1.04
LSM8-204ENST00000424702 UBAC1Q9BSL1 405 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 SLC4A4Q9Y6R1 1079 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 ZAP70P43403 619 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 UBE3CQ15386 1083 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 SYT17Q9BSW7 474 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 PDS5AQ29RF7 1337 aaKnown RBP8.55□□□□□ -1.04
LSM8-204ENST00000424702 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 AGBL3Q8NEM8 1001 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
LSM8-204ENST00000424702 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 ZNF213O14771 459 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 HSPA4P34932 840 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 FAM184AQ8NB25 1140 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 SH2D4AQ9H788 454 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 AFDNP55196 1824 aaKnown RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 A0A0D9SFI3 127 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 RAD17O75943 681 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 FOXD4L5Q5VV16 416 aaPredicted RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 CREB3L3Q68CJ9 461 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 IQCA1Q86XH1 822 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 FOXD4L4Q8WXT5 416 aaPredicted RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 ZNF609O15014 1411 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 LY75O60449 1722 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 MINDY4BA8MYZ0 360 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 ARID4AP29374 1257 aaPredicted RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
LSM8-204ENST00000424702 KIAA0825Q8IV33 1275 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 LIMCH1Q9UPQ0 1083 aa8.54□□□□□ -1.04
LSM8-204ENST00000424702 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
LSM8-204ENST00000424702 MBD4O95243 580 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 FKBP1AP62942 108 aaKnown RBP8.53□□□□□ -1.04
LSM8-204ENST00000424702 SUPT20HL1Q3ZLR7 823 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
LSM8-204ENST00000424702 KRT23Q9C075 422 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 TAOK2Q9UL54 1235 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 ATP6V1DQ9Y5K8 247 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 CPLX1O14810 134 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 FBXO33Q7Z6M2 555 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 NEK1Q96PY6 1258 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 SBF2Q86WG5 1849 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 SCN7AQ01118 1682 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 ARFGEF2Q9Y6D5 1785 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 DHX16O60231 1041 aaKnown RBP8.53□□□□□ -1.04
LSM8-204ENST00000424702 PDE6AP16499 860 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 CCDC129Q6ZRS4 1044 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
LSM8-204ENST00000424702 USP40Q9NVE5 1235 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 HACL1Q9UJ83 578 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 LTBP3Q9NS15 1303 aa8.53□□□□□ -1.04
LSM8-204ENST00000424702 RAD21O60216 631 aa8.52□□□□□ -1.04
LSM8-204ENST00000424702 TRAF1Q13077 416 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms