RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 NSUN4Q96CB9 384 aaKnown RBP16.22■□□□□ 0.19
PRPF39-202ENST00000424478 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 TTF2Q9UNY4 1162 aaKnown RBP16.22■□□□□ 0.19
PRPF39-202ENST00000424478 MAST3O60307 1309 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 TTF1Q15361 905 aaPredicted RBP16.22■□□□□ 0.19
PRPF39-202ENST00000424478 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
PRPF39-202ENST00000424478 SCAF8Q9UPN6 1271 aaKnown RBP16.22■□□□□ 0.19
PRPF39-202ENST00000424478 NAA16Q6N069 864 aaPredicted RBP16.21■□□□□ 0.19
PRPF39-202ENST00000424478 AATFQ9NY61 560 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■■ 32.8
PRPF39-202ENST00000424478 FAM205AQ6ZU69 1335 aa16.21■□□□□ 0.19
PRPF39-202ENST00000424478 LMNB1P20700 586 aa16.21■□□□□ 0.19
PRPF39-202ENST00000424478 PTH1RQ03431 593 aa16.21■□□□□ 0.19
PRPF39-202ENST00000424478 ZNF646O15015 1829 aaPredicted RBP16.21■□□□□ 0.19
PRPF39-202ENST00000424478 PRKAB2O43741 272 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRPF39-202ENST00000424478 MBD4O95243 580 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 GRIPAP1Q4V328 841 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
PRPF39-202ENST00000424478 SGSM2O43147 1006 aa16.19■□□□□ 0.18
PRPF39-202ENST00000424478 EGFRP00533 1210 aa16.19■□□□□ 0.18
PRPF39-202ENST00000424478 RBM5P52756 815 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRPF39-202ENST00000424478 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
PRPF39-202ENST00000424478 CACNB3P54284 484 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 RBM26Q5T8P6 1007 aaKnown RBP16.18■□□□□ 0.18
PRPF39-202ENST00000424478 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 SMIM22K7EJ46 135 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 GPAA1O43292 621 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
PRPF39-202ENST00000424478 CIAPIN1Q6FI81 312 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 STK11IPQ8N1F8 1099 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 APPBP2Q92624 585 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 EVX2Q03828 476 aa16.18■□□□□ 0.18
PRPF39-202ENST00000424478 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
PRPF39-202ENST00000424478 RSBN1LQ6PCB5 846 aaPredicted RBP16.17■□□□□ 0.18
PRPF39-202ENST00000424478 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
PRPF39-202ENST00000424478 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
PRPF39-202ENST00000424478 FZD9O00144 591 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 FOXP2O15409 715 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 TBC1D22AQ8WUA7 517 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 TAF6LQ9Y6J9 622 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 VIL1P09327 827 aaKnown RBP16.16■□□□□ 0.18
PRPF39-202ENST00000424478 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
PRPF39-202ENST00000424478 UBE3CQ15386 1083 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 DAGLAQ9Y4D2 1042 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 APPP05067 770 aa16.16■□□□□ 0.18
PRPF39-202ENST00000424478 EIF6P56537 245 aaKnown RBP16.16■□□□□ 0.18
PRPF39-202ENST00000424478 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
PRPF39-202ENST00000424478 BTDP43251 543 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
PRPF39-202ENST00000424478 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
PRPF39-202ENST00000424478 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
PRPF39-202ENST00000424478 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 CRKP46108 304 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 RIOK1Q9BRS2 568 aaKnown RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 PSME4Q14997 1843 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 DICER1Q9UPY3 1922 aaKnown RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 PALD1Q9ULE6 856 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 MROH7-TTC4A0A0A0MT08 1334 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 ASTN2O75129 1339 aaPredicted RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 HIP1O00291 1037 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 SLURP2P0DP57 97 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 HAND2P61296 217 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
PRPF39-202ENST00000424478 GMLQ99445 158 aa16.14■□□□□ 0.17
PRPF39-202ENST00000424478 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
PRPF39-202ENST00000424478 CLRN2A0PK11 232 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 HSPD1P10809 573 aaKnown RBP16.13■□□□□ 0.17
PRPF39-202ENST00000424478 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
PRPF39-202ENST00000424478 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
PRPF39-202ENST00000424478 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 SLC4A4Q9Y6R1 1079 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 PICALMQ13492 652 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 VPS33BQ9H267 617 aa16.13■□□□□ 0.17
PRPF39-202ENST00000424478 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
PRPF39-202ENST00000424478 TDRD3Q9H7E2 651 aaKnown RBP16.12■□□□□ 0.17
PRPF39-202ENST00000424478 EPB41L4AQ9HCS5 686 aaPredicted RBP16.12■□□□□ 0.17
PRPF39-202ENST00000424478 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms