RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 HMG20BQ9P0W2 317 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 NDUFB9Q9Y6M9 179 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
CPSF4-202ENST00000412686 ADM5C9JUS6 153 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 WNT10BO00744 389 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 ARID4AP29374 1257 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-202ENST00000412686 FSTL1Q12841 308 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 TTC39AQ5SRH9 613 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 ANGEL2Q5VTE6 544 aaKnown RBP9.48□□□□□ -0.89
CPSF4-202ENST00000412686 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 PRMT6Q96LA8 375 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-202ENST00000412686 DCTPP1Q9H773 170 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 GNL3LQ9NVN8 582 aaKnown RBP9.48□□□□□ -0.89
CPSF4-202ENST00000412686 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 HDAC9Q9UKV0 1011 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 DENND2AQ9ULE3 1009 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
CPSF4-202ENST00000412686 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 SEMA3EO15041 775 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 CRKP46108 304 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 RBM5P52756 815 aaKnown RBP eCLIP9.47□□□□□ -0.893e-9■□□□□ 10.6
CPSF4-202ENST00000412686 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 USP48Q86UV5 1035 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
CPSF4-202ENST00000412686 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 WDR66Q8TBY9 1149 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 TBC1D22AQ8WUA7 517 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-202ENST00000412686 LRRCC1Q9C099 1032 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
CPSF4-202ENST00000412686 MAST2Q6P0Q8 1798 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 IGHDP01880 384 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.9
CPSF4-202ENST00000412686 UQCRFS1P1P0C7P4 283 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 HSPA6P17066 643 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 ZAP70P43403 619 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 DLGAP5Q15398 846 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 PRAMEF18Q5VWM3 479 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 TSHZ3Q63HK5 1081 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-202ENST00000412686 ZC3H15Q8WU90 426 aaKnown RBP9.46□□□□□ -0.9
CPSF4-202ENST00000412686 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 SALL1Q9NSC2 1324 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.9
CPSF4-202ENST00000412686 TRPM7Q96QT4 1865 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 LDHBP07195 334 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 CACNB3P54284 484 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 ZNF384Q8TF68 577 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 DCPSQ96C86 337 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 EDC3Q96F86 508 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 ZNF408Q9H9D4 720 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 SERPINA10Q9UK55 444 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
CPSF4-202ENST00000412686 DOCK2Q92608 1830 aa9.45□□□□□ -0.9
CPSF4-202ENST00000412686 APLP1P51693 650 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 CST9Q5W186 159 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 APOBEC3HQ6NTF7 200 aaKnown RBP9.44□□□□□ -0.9
CPSF4-202ENST00000412686 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 DZIP1Q86YF9 867 aaKnown RBP9.44□□□□□ -0.9
CPSF4-202ENST00000412686 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-202ENST00000412686 BOLA2Q9H3K6 86 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 VEZTQ9HBM0 779 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
CPSF4-202ENST00000412686 MAST3O60307 1309 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPSF4-202ENST00000412686 HDLBPQ00341 1268 aaKnown RBP9.43□□□□□ -0.9
CPSF4-202ENST00000412686 MECOMQ03112 1051 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 ANKRD45Q5TZF3 282 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 SULF1Q8IWU6 871 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 CDAN1Q8IWY9 1227 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 ZGPATQ8N5A5 531 aaKnown RBP9.43□□□□□ -0.9
CPSF4-202ENST00000412686 CDCA5Q96FF9 252 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 DNAJC2Q99543 621 aaKnown RBP9.43□□□□□ -0.9
CPSF4-202ENST00000412686 RAI14Q9P0K7 980 aa9.43□□□□□ -0.9
CPSF4-202ENST00000412686 ZNF70Q9UC06 446 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-202ENST00000412686 GAKO14976 1311 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 CELF2O95319 508 aaKnown RBP9.42□□□□□ -0.9
CPSF4-202ENST00000412686 CHGBP05060 677 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 MMP14P50281 582 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 AAMPQ13685 434 aa9.42□□□□□ -0.9
CPSF4-202ENST00000412686 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms