RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SPDYE2BA6NHP3 402 aa27.42■■□□□ 1.98
PTCD3-203ENST00000409783 SPDYE6P0CI01 402 aa27.42■■□□□ 1.98
PTCD3-203ENST00000409783 HSPA6P17066 643 aa27.42■■□□□ 1.98
PTCD3-203ENST00000409783 CRKP46108 304 aa27.42■■□□□ 1.98
PTCD3-203ENST00000409783 FMR1Q06787 632 aaKnown RBP eCLIP27.42■■□□□ 1.98
PTCD3-203ENST00000409783 ANGEL2Q5VTE6 544 aaKnown RBP27.42■■□□□ 1.98
PTCD3-203ENST00000409783 PRMT6Q96LA8 375 aaPredicted RBP27.42■■□□□ 1.98
PTCD3-203ENST00000409783 MYO5AQ9Y4I1 1855 aaKnown RBP27.41■■□□□ 1.98
PTCD3-203ENST00000409783 PITPNM2Q9BZ72 1349 aa27.41■■□□□ 1.98
PTCD3-203ENST00000409783 TRPM7Q96QT4 1865 aa27.4■■□□□ 1.98
PTCD3-203ENST00000409783 TRAF5O00463 557 aa27.4■■□□□ 1.98
PTCD3-203ENST00000409783 IFIT2P09913 472 aaKnown RBP27.4■■□□□ 1.98
PTCD3-203ENST00000409783 CDC37L1Q7L3B6 337 aa27.4■■□□□ 1.98
PTCD3-203ENST00000409783 ZGPATQ8N5A5 531 aaKnown RBP27.4■■□□□ 1.98
PTCD3-203ENST00000409783 DCPSQ96C86 337 aaKnown RBP27.4■■□□□ 1.98
PTCD3-203ENST00000409783 SNRKQ9NRH2 765 aa27.4■■□□□ 1.98
PTCD3-203ENST00000409783 MAST3O60307 1309 aa27.4■■□□□ 1.98
PTCD3-203ENST00000409783 LDHBP07195 334 aaKnown RBP27.39■■□□□ 1.98
PTCD3-203ENST00000409783 DLK2Q6UY11 383 aa27.39■■□□□ 1.98
PTCD3-203ENST00000409783 TBC1D9Q6ZT07 1266 aa27.39■■□□□ 1.98
PTCD3-203ENST00000409783 USP48Q86UV5 1035 aa27.39■■□□□ 1.98
PTCD3-203ENST00000409783 MYH2Q9UKX2 1941 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 IGHDP01880 384 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 APLP1P51693 650 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 HHIPL2Q6UWX4 724 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 KRT26Q7Z3Y9 468 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 TEKT1Q969V4 418 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 ABCF2Q9UG63 623 aa27.38■■□□□ 1.97
PTCD3-203ENST00000409783 ADM5C9JUS6 153 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 CYP2E1P05181 493 aaPredicted RBP27.37■■□□□ 1.97
PTCD3-203ENST00000409783 ZAP70P43403 619 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 RBM5P52756 815 aaKnown RBP eCLIP27.37■■□□□ 1.97
PTCD3-203ENST00000409783 DIXDC1Q155Q3 683 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 ZNF384Q8TF68 577 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 ZDHHC15Q96MV8 337 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 BCL11AQ9H165 835 aa27.37■■□□□ 1.97
PTCD3-203ENST00000409783 SPTY2D1Q68D10 685 aaPredicted RBP27.36■■□□□ 1.97
PTCD3-203ENST00000409783 GCC1Q96CN9 775 aa27.36■■□□□ 1.97
PTCD3-203ENST00000409783 SCAF8Q9UPN6 1271 aaKnown RBP27.36■■□□□ 1.97
PTCD3-203ENST00000409783 APOBEC3HQ6NTF7 200 aaKnown RBP27.35■■□□□ 1.97
PTCD3-203ENST00000409783 SMC5Q8IY18 1101 aa27.35■■□□□ 1.97
PTCD3-203ENST00000409783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.35■■□□□ 1.97
PTCD3-203ENST00000409783 RWDD1Q9H446 243 aaPredicted RBP27.35■■□□□ 1.97
PTCD3-203ENST00000409783 DOCK2Q92608 1830 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 SPDYE2Q495Y8 402 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 ERICH6Q7L0X2 663 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 SULF1Q8IWU6 871 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 DAGLAQ9Y4D2 1042 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 NDUFB9Q9Y6M9 179 aa27.34■■□□□ 1.97
PTCD3-203ENST00000409783 CLRN2A0PK11 232 aa27.33■■□□□ 1.97
PTCD3-203ENST00000409783 MECOMQ03112 1051 aa27.33■■□□□ 1.97
PTCD3-203ENST00000409783 CST9Q5W186 159 aa27.33■■□□□ 1.97
PTCD3-203ENST00000409783 TDRD3Q9H7E2 651 aaKnown RBP27.33■■□□□ 1.97
PTCD3-203ENST00000409783 PIH1D3Q9NQM4 214 aaKnown RBP27.33■■□□□ 1.97
PTCD3-203ENST00000409783 ZNF70Q9UC06 446 aaPredicted RBP27.33■■□□□ 1.97
PTCD3-203ENST00000409783 MAST2Q6P0Q8 1798 aa27.32■■□□□ 1.96
PTCD3-203ENST00000409783 ATP5JP18859 108 aa27.32■■□□□ 1.96
PTCD3-203ENST00000409783 APOBEC3FQ8IUX4 373 aaKnown RBP27.32■■□□□ 1.96
PTCD3-203ENST00000409783 NSUN4Q96CB9 384 aaKnown RBP27.32■■□□□ 1.96
PTCD3-203ENST00000409783 FAM163AQ96GL9 167 aaPredicted RBP27.32■■□□□ 1.96
PTCD3-203ENST00000409783 GAKO14976 1311 aa27.32■■□□□ 1.96
PTCD3-203ENST00000409783 MYO1BO43795 1136 aa27.31■■□□□ 1.96
PTCD3-203ENST00000409783 HTRA3P83110 453 aa27.31■■□□□ 1.96
PTCD3-203ENST00000409783 DZIP1Q86YF9 867 aaKnown RBP27.31■■□□□ 1.96
PTCD3-203ENST00000409783 ANTXR1Q9H6X2 564 aa27.31■■□□□ 1.96
PTCD3-203ENST00000409783 ANKRD45Q5TZF3 282 aa27.3■■□□□ 1.96
PTCD3-203ENST00000409783 TMEM88BA6NKF7 163 aa27.29■■□□□ 1.96
PTCD3-203ENST00000409783 OTUD7AQ8TE49 926 aaPredicted RBP27.29■■□□□ 1.96
PTCD3-203ENST00000409783 CDCA5Q96FF9 252 aa27.29■■□□□ 1.96
PTCD3-203ENST00000409783 CREBZFQ9NS37 354 aa27.29■■□□□ 1.96
PTCD3-203ENST00000409783 RAI14Q9P0K7 980 aa27.29■■□□□ 1.96
PTCD3-203ENST00000409783 LRP2BPQ9P2M1 347 aa27.29■■□□□ 1.96
PTCD3-203ENST00000409783 SALL3Q9BXA9 1300 aa27.28■■□□□ 1.96
PTCD3-203ENST00000409783 ECHDC1Q9NTX5 307 aa27.28■■□□□ 1.96
PTCD3-203ENST00000409783 MROH7-TTC4A0A0A0MT08 1334 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 IGSF3O75054 1194 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 CELF2O95319 508 aaKnown RBP27.27■■□□□ 1.96
PTCD3-203ENST00000409783 PRAMEF18Q5VWM3 479 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 DEFB129Q9H1M3 183 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 BOLA2Q9H3K6 86 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 VEZTQ9HBM0 779 aa27.27■■□□□ 1.96
PTCD3-203ENST00000409783 CDC42EP5Q6NZY7 148 aa27.26■■□□□ 1.95
PTCD3-203ENST00000409783 SLF2Q8IX21 1173 aa27.26■■□□□ 1.95
PTCD3-203ENST00000409783 HAUS7Q99871 368 aa27.26■■□□□ 1.95
PTCD3-203ENST00000409783 GPR75-ASB3A0A0A6YYF3 556 aa27.25■■□□□ 1.95
PTCD3-203ENST00000409783 CACNB3P54284 484 aa27.25■■□□□ 1.95
PTCD3-203ENST00000409783 EDC3Q96F86 508 aaKnown RBP27.25■■□□□ 1.95
PTCD3-203ENST00000409783 CNTNAP1P78357 1384 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 GSTO1P78417 241 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 FKBP1CQ5VVH2 108 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 TSHZ3Q63HK5 1081 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 DNAJC2Q99543 621 aaKnown RBP27.24■■□□□ 1.95
PTCD3-203ENST00000409783 ZNF408Q9H9D4 720 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 PPP2R3BQ9Y5P8 575 aa27.24■■□□□ 1.95
PTCD3-203ENST00000409783 TCP10L2B9ZVM9 353 aa27.23■■□□□ 1.95
PTCD3-203ENST00000409783 GOLIM4O00461 696 aa27.23■■□□□ 1.95
PTCD3-203ENST00000409783 LDHCP07864 332 aa27.23■■□□□ 1.95
PTCD3-203ENST00000409783 RASA3Q14644 834 aa27.23■■□□□ 1.95
PTCD3-203ENST00000409783 TTC41PQ6P2S7 1318 aa27.22■■□□□ 1.95
PTCD3-203ENST00000409783 IDH1O75874 414 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms