RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IDI1Q13907 227 aa19.93■□□□□ 0.78
SMPD4-202ENST00000409031 A2MP01023 1474 aa19.93■□□□□ 0.78
SMPD4-202ENST00000409031 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
SMPD4-202ENST00000409031 NEBLO76041 1014 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 GNGT1P63211 74 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 ATP11AP98196 1134 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 RILPL1Q5EBL4 403 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 SPATA24Q86W54 205 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 KRT9P35527 623 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 CCT6AP40227 531 aaKnown RBP19.92■□□□□ 0.78
SMPD4-202ENST00000409031 CHST3Q7LGC8 479 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 PAG1Q9NWQ8 432 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 TLDC2A0PJX2 215 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 PPFIA4O75335 1185 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 RBM6P78332 1123 aaKnown RBP19.92■□□□□ 0.78
SMPD4-202ENST00000409031 SETDB1Q15047 1291 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 TCERG1LQ5VWI1 586 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
SMPD4-202ENST00000409031 NSFL1CQ9UNZ2 370 aaKnown RBP19.92■□□□□ 0.78
SMPD4-202ENST00000409031 PAK2Q13177 524 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 JAKMIP2Q96AA8 810 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 CAPS2Q9BXY5 557 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 LRCH2Q5VUJ6 765 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 STX10O60499 249 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 SRGAP1Q7Z6B7 1085 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 PPFIBP2Q8ND30 876 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 TRAPPC8Q9Y2L5 1435 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
SMPD4-202ENST00000409031 CETN1Q12798 172 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
SMPD4-202ENST00000409031 RPAINQ86UA6 219 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 TMEM87AQ8NBN3 555 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 TRIM7Q9C029 511 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 STIM2Q9P246 746 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 WWC3Q9ULE0 1092 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 SAR1BQ9Y6B6 198 aa19.91■□□□□ 0.78
SMPD4-202ENST00000409031 GOLGA8KD6RF30 607 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 IGHMBP2P38935 993 aaKnown RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 ZSWIM6Q9HCJ5 1215 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 STRN4Q9NRL3 753 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 JAK2O60674 1132 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 SEC31AO94979 1220 aaKnown RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 PNMA8AQ86V59 439 aaPredicted RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 PPIP5K1Q6PFW1 1433 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 SLC8A1P32418 973 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 G2E3Q7L622 706 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 UBLCP1Q8WVY7 318 aaPredicted RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 VPS16Q9H269 839 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 MTRF1LQ9UGC7 380 aaKnown RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 TTC21AQ8NDW8 1320 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 CHL1O00533 1208 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 RNF113AO15541 343 aaKnown RBP19.9■□□□□ 0.78
SMPD4-202ENST00000409031 PCK1P35558 622 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 CDC23Q9UJX2 597 aa19.9■□□□□ 0.78
SMPD4-202ENST00000409031 SHANK2Q9UPX8 1470 aa19.89■□□□□ 0.78
SMPD4-202ENST00000409031 IL15P40933 162 aaPredicted RBP19.89■□□□□ 0.77
SMPD4-202ENST00000409031 FBXO18Q8NFZ0 1043 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 SECISBP2LQ93073 1101 aaKnown RBP19.89■□□□□ 0.77
SMPD4-202ENST00000409031 UBA5Q9GZZ9 404 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 VEZTQ9HBM0 779 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 DUOX2Q9NRD8 1548 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 VIMP08670 466 aaKnown RBP19.89■□□□□ 0.77
SMPD4-202ENST00000409031 ZSCAN20P17040 1043 aaPredicted RBP19.89■□□□□ 0.77
SMPD4-202ENST00000409031 GCKP35557 465 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 MAGEA9P43362 315 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 USP5P45974 858 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 ATP2B2Q01814 1243 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 WWC2Q6AWC2 1192 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 ANKRD13DQ6ZTN6 518 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 CCDC26Q8TAB7 109 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 HELLSQ9NRZ9 838 aa19.89■□□□□ 0.77
SMPD4-202ENST00000409031 PNMA6EA0A0J9YXQ4 647 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 FAM204AQ9H8W3 233 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 SYNRGQ9UMZ2 1314 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 ADKP55263 362 aaKnown RBP19.88■□□□□ 0.77
SMPD4-202ENST00000409031 ASIC1P78348 528 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 TBC1D8BQ0IIM8 1120 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 SAMD1Q6SPF0 538 aaPredicted RBP19.88■□□□□ 0.77
SMPD4-202ENST00000409031 BAIAP2L1Q9UHR4 511 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 SLC5A1P13866 664 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 NUP58Q9BVL2 599 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 MKNK2Q9HBH9 465 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 SMARCC2Q8TAQ2 1214 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
SMPD4-202ENST00000409031 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
SMPD4-202ENST00000409031 PPP1R2P41236 205 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 CCT5P48643 541 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 CROCCP2Q86T23 111 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 FAM227BQ96M60 508 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 CWC25Q9NXE8 425 aaPredicted RBP19.87■□□□□ 0.77
SMPD4-202ENST00000409031 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 SLF1Q9BQI6 1058 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 E7EVH7 732 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 USP28Q96RU2 1077 aa19.87■□□□□ 0.77
SMPD4-202ENST00000409031 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
SMPD4-202ENST00000409031 DTNBO60941 627 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms