RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SPATA5Q8NB90 893 aa19.5■□□□□ 0.71
GDPD3-202ENST00000406256 ZNF384Q8TF68 577 aa19.5■□□□□ 0.71
GDPD3-202ENST00000406256 PRMT6Q96LA8 375 aaPredicted RBP19.5■□□□□ 0.71
GDPD3-202ENST00000406256 GLIS2Q9BZE0 524 aaPredicted RBP19.5■□□□□ 0.71
GDPD3-202ENST00000406256 GGA3Q9NZ52 723 aa19.5■□□□□ 0.71
GDPD3-202ENST00000406256 HDAC9Q9UKV0 1011 aa19.5■□□□□ 0.71
GDPD3-202ENST00000406256 IGHDP01880 384 aa19.49■□□□□ 0.71
GDPD3-202ENST00000406256 UQCRFS1P1P0C7P4 283 aa19.49■□□□□ 0.71
GDPD3-202ENST00000406256 TTC39AQ5SRH9 613 aa19.49■□□□□ 0.71
GDPD3-202ENST00000406256 SERPINA10Q9UK55 444 aa19.49■□□□□ 0.71
GDPD3-202ENST00000406256 TRAF5O00463 557 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 CRKP46108 304 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
GDPD3-202ENST00000406256 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 ANGEL2Q5VTE6 544 aaKnown RBP19.48■□□□□ 0.71
GDPD3-202ENST00000406256 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 CDK5RAP2Q96SN8 1893 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 MYH7P12883 1935 aa19.48■□□□□ 0.71
GDPD3-202ENST00000406256 CYP2E1P05181 493 aaPredicted RBP19.47■□□□□ 0.71
GDPD3-202ENST00000406256 HSPA6P17066 643 aa19.47■□□□□ 0.71
GDPD3-202ENST00000406256 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
GDPD3-202ENST00000406256 MRIQ9BWK5 157 aa19.47■□□□□ 0.71
GDPD3-202ENST00000406256 SCAF8Q9UPN6 1271 aaKnown RBP19.47■□□□□ 0.71
GDPD3-202ENST00000406256 NDUFB9Q9Y6M9 179 aa19.47■□□□□ 0.71
GDPD3-202ENST00000406256 ADM5C9JUS6 153 aa19.46■□□□□ 0.71
GDPD3-202ENST00000406256 ZAP70P43403 619 aa19.46■□□□□ 0.71
GDPD3-202ENST00000406256 DLGAP5Q15398 846 aa19.46■□□□□ 0.71
GDPD3-202ENST00000406256 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
GDPD3-202ENST00000406256 SALL3Q9BXA9 1300 aa19.46■□□□□ 0.71
GDPD3-202ENST00000406256 APOBEC3HQ6NTF7 200 aaKnown RBP19.45■□□□□ 0.7
GDPD3-202ENST00000406256 HHIPL2Q6UWX4 724 aa19.45■□□□□ 0.7
GDPD3-202ENST00000406256 DAGLAQ9Y4D2 1042 aa19.45■□□□□ 0.7
GDPD3-202ENST00000406256 MAST3O60307 1309 aa19.45■□□□□ 0.7
GDPD3-202ENST00000406256 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 IFIT2P09913 472 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 APLP1P51693 650 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 CDC37L1Q7L3B6 337 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 KRT26Q7Z3Y9 468 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 USP48Q86UV5 1035 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 OTUD7AQ8TE49 926 aaPredicted RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 ZDHHC15Q96MV8 337 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 PIH1D3Q9NQM4 214 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 GAKO14976 1311 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 SPDYE2Q495Y8 402 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 CST9Q5W186 159 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 ZGPATQ8N5A5 531 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 TEKT1Q969V4 418 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 DCPSQ96C86 337 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
GDPD3-202ENST00000406256 GCC1Q96CN9 775 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 ABCF2Q9UG63 623 aa19.44■□□□□ 0.7
GDPD3-202ENST00000406256 FOCADQ5VW36 1801 aa19.43■□□□□ 0.7
GDPD3-202ENST00000406256 CLRN2A0PK11 232 aa19.43■□□□□ 0.7
GDPD3-202ENST00000406256 HTRA3P83110 453 aa19.43■□□□□ 0.7
GDPD3-202ENST00000406256 MECOMQ03112 1051 aa19.43■□□□□ 0.7
GDPD3-202ENST00000406256 TDRD3Q9H7E2 651 aaKnown RBP19.43■□□□□ 0.7
GDPD3-202ENST00000406256 SSC5DA1L4H1 1573 aa19.42■□□□□ 0.7
GDPD3-202ENST00000406256 ATP5JP18859 108 aa19.42■□□□□ 0.7
GDPD3-202ENST00000406256 RBM5P52756 815 aaKnown RBP eCLIP19.42■□□□□ 0.7
GDPD3-202ENST00000406256 FAM163AQ96GL9 167 aaPredicted RBP19.42■□□□□ 0.7
GDPD3-202ENST00000406256 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
GDPD3-202ENST00000406256 ZNF70Q9UC06 446 aaPredicted RBP19.42■□□□□ 0.7
GDPD3-202ENST00000406256 RFX7Q2KHR2 1363 aa19.42■□□□□ 0.7
GDPD3-202ENST00000406256 PAPPA2Q9BXP8 1791 aa19.41■□□□□ 0.7
GDPD3-202ENST00000406256 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
GDPD3-202ENST00000406256 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
GDPD3-202ENST00000406256 TSHZ3Q63HK5 1081 aa19.4■□□□□ 0.7
GDPD3-202ENST00000406256 SPTY2D1Q68D10 685 aaPredicted RBP19.4■□□□□ 0.7
GDPD3-202ENST00000406256 SULF1Q8IWU6 871 aa19.4■□□□□ 0.7
GDPD3-202ENST00000406256 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
GDPD3-202ENST00000406256 CDCA5Q96FF9 252 aa19.4■□□□□ 0.7
GDPD3-202ENST00000406256 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
GDPD3-202ENST00000406256 MROH7-TTC4A0A0A0MT08 1334 aa19.39■□□□□ 0.69
GDPD3-202ENST00000406256 PRAMEF18Q5VWM3 479 aa19.39■□□□□ 0.69
GDPD3-202ENST00000406256 CDC42EP5Q6NZY7 148 aa19.39■□□□□ 0.69
GDPD3-202ENST00000406256 ADGRA1Q86SQ6 560 aa19.39■□□□□ 0.69
GDPD3-202ENST00000406256 DZIP1Q86YF9 867 aaKnown RBP19.39■□□□□ 0.69
GDPD3-202ENST00000406256 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
GDPD3-202ENST00000406256 OTOFQ9HC10 1997 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 CACNB3P54284 484 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 CDAN1Q8IWY9 1227 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 PI4K2BQ8TCG2 481 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 HAUS7Q99871 368 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 BOLA2Q9H3K6 86 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 ECHDC1Q9NTX5 307 aa19.38■□□□□ 0.69
GDPD3-202ENST00000406256 GPR75-ASB3A0A0A6YYF3 556 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 CELF2O95319 508 aaKnown RBP19.37■□□□□ 0.69
GDPD3-202ENST00000406256 DEFB129Q9H1M3 183 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 VEZTQ9HBM0 779 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 RAI14Q9P0K7 980 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 LRP2BPQ9P2M1 347 aa19.37■□□□□ 0.69
GDPD3-202ENST00000406256 TMEM88BA6NKF7 163 aa19.36■□□□□ 0.69
GDPD3-202ENST00000406256 MYO1BO43795 1136 aa19.36■□□□□ 0.69
GDPD3-202ENST00000406256 RHBDL3P58872 404 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms