RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PPP4CP60510 307 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 NUDT18Q6ZVK8 323 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 COG3Q96JB2 828 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 SCYL1Q96KG9 808 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 MTRQ99707 1265 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 HINFPQ9BQA5 517 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 C12orf49Q9H741 205 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 IL21Q9HBE4 155 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 BLMP54132 1417 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 PEAK1Q9H792 1746 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 KIF24Q5T7B8 1368 aa6.81□□□□□ -1.32
HMGB3P7-201ENST00000400214 CGNL1Q0VF96 1302 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 WDR17Q8IZU2 1322 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 CDC45O75419 566 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 BDNFP23560 247 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 MAP7D1Q3KQU3 841 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 WDR75Q8IWA0 830 aaKnown RBP6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 SEPT12Q8IYM1 358 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 CRELD1Q96HD1 420 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 SENP7Q9BQF6 1050 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 NEUROD4Q9HD90 331 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 CCDC87Q9NVE4 849 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 RTL1A6NKG5 1358 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 NSD2O96028 1365 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 CCDC7Q96M83 1385 aa6.8□□□□□ -1.32
HMGB3P7-201ENST00000400214 LRRC37A3O60309 1634 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 WEE1P30291 646 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 PDE6BP35913 854 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 GNALP38405 381 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 CHMP4BP1P59074 171 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 GTF2IP78347 998 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 PAK2Q13177 524 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 CCSAPQ6IQ19 270 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 TCP11L2Q8N4U5 519 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 IP6K1Q92551 441 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 SLC39A13Q96H72 371 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 CARD10Q9BWT7 1032 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 PANK3Q9H999 370 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 SNTG2Q9NY99 539 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 SFMBT1Q9UHJ3 866 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 RBM19Q9Y4C8 960 aaKnown RBP6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 RGPD1P0DJD0 1748 aa6.79□□□□□ -1.32
HMGB3P7-201ENST00000400214 MAP3K19Q56UN5 1328 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 WASHC2AQ641Q2 1341 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 DISP2A7MBM2 1401 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 FAM221BA6H8Z2 402 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 CCER2I3L3R5 266 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 LDHAP00338 332 aaKnown RBP6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 GNA15P30679 374 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 PTPN12Q05209 780 aaKnown RBP6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 OS9Q13438 667 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 DHX8Q14562 1220 aaKnown RBP6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 TREML4Q6UXN2 200 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 TRIM67Q6ZTA4 783 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 SH3TC2Q8TF17 1288 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 ZNF408Q9H9D4 720 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 HOMER2Q9NSB8 354 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 NPC1L1Q9UHC9 1359 aa6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 TNS1Q9HBL0 1735 aaKnown RBP6.78□□□□□ -1.32
HMGB3P7-201ENST00000400214 SHANK3Q9BYB0 1731 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 PNMA6FA0A0J9YX94 578 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 POTECB2RU33 542 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 FZD6O60353 706 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 MZF1P28698 734 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 HOXC9P31274 260 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 MASP1P48740 699 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 GRIPAP1Q4V328 841 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 TOM1L2Q6ZVM7 507 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 KRT27Q7Z3Y8 459 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 GPRASP2Q96D09 838 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 FAM129BQ96TA1 746 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 MPHOSPH6Q99547 160 aaKnown RBP6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 SIRPGQ9P1W8 387 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 GGT7Q9UJ14 662 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 TSKSQ9UJT2 592 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 PCDHB9Q9Y5E1 797 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 INSRP06213 1382 aa6.77□□□□□ -1.33
HMGB3P7-201ENST00000400214 BCL9O00512 1426 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 SMG6Q86US8 1419 aaKnown RBP6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 EXOC5O00471 708 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 SLC10A3P09131 477 aa6.76□□□□□ -1.33
HMGB3P7-201ENST00000400214 FBLN1P23142 703 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms