RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 PI16Q6UXB8 463 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 SMARCC2Q8TAQ2 1214 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 NBPF3Q9H094 633 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 WWC3Q9ULE0 1092 aa8.13□□□□□ -1.11
CX3CR1-202ENST00000399220 CHGBP05060 677 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 PDE6BP35913 854 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 IMMTQ16891 758 aaKnown RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 FAM163AQ96GL9 167 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 RTFDC1Q9BY42 306 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 ATP6V0A2Q9Y487 856 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 GREB1LQ9C091 1923 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 PFKFB2O60825 505 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 PHF14O94880 888 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 SLC15A2Q16348 729 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 SPTY2D1Q68D10 685 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 GBP4Q96PP9 640 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 TPCN1Q9ULQ1 816 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 PPP4CP60510 307 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 ME3Q16798 604 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 ZNF384Q8TF68 577 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 GTF3C6Q969F1 213 aa8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 NSUN4Q96CB9 384 aaKnown RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 UPF3BQ9BZI7 483 aaKnown RBP8.12□□□□□ -1.11
CX3CR1-202ENST00000399220 SLX4Q8IY92 1834 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 GSG1L2A8MUP6 293 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 SBK1Q52WX2 424 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 GPSM2P81274 684 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 EPB41L4AQ9HCS5 686 aaPredicted RBP8.11□□□□□ -1.11
CX3CR1-202ENST00000399220 WDR33Q9C0J8 1336 aaKnown RBP8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 GYG1P46976 350 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 KCNJ4P48050 445 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 SGMS1Q86VZ5 419 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 IFNL3Q8IZI9 196 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 MAGEB6Q8N7X4 407 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 MRIQ9BWK5 157 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 TFCP2L1Q9NZI6 479 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 MKRN1Q9UHC7 482 aaKnown RBP8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 BAZ2AQ9UIF9 1905 aaKnown RBP8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 FRAT2O75474 233 aaPredicted RBP8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 LARGE1O95461 756 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 NCOA7Q8NI08 942 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 FER1L6Q2WGJ9 1857 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 GAKO14976 1311 aa8.1□□□□□ -1.11
CX3CR1-202ENST00000399220 FSD2A1L4K1 749 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 ZNF213O14771 459 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 LIFRP42702 1097 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 TBC1D16Q8TBP0 767 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 VPS33BQ9H267 617 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 COL2A1P02458 1487 aaPredicted RBP8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 ARFGEF1Q9Y6D6 1849 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 MYH1P12882 1939 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 BAG4O95429 457 aaKnown RBP8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 MCM5P33992 734 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 ANTXR2P58335 489 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 GSTO1P78417 241 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 NBR1Q14596 966 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 TBC1D22AQ8WUA7 517 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 AIDAQ96BJ3 306 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 ATP8A2Q9NTI2 1148 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 PARP3Q9Y6F1 533 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 SNAP23O00161 211 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 IDH1O75874 414 aaKnown RBP8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 KLRK1P26718 216 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 COL9A3Q14050 684 aaPredicted RBP8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 Q6ZUG5 572 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 ADGRA1Q86SQ6 560 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 COA1Q9GZY4 146 aa8.09□□□□□ -1.11
CX3CR1-202ENST00000399220 EP400Q96L91 3159 aa8.09□□□□□ -1.12
CX3CR1-202ENST00000399220 MBD4O95243 580 aa8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 HSP90AA1P07900 732 aaKnown RBP8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 PDCP20941 246 aa8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 LCORLQ8N3X6 602 aa8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 KRT23Q9C075 422 aa8.08□□□□□ -1.12
CX3CR1-202ENST00000399220 CD209Q9NNX6 404 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms