RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 EXOC5O00471 708 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 SETQ01105 290 aaPredicted RBP13.24□□□□□ -0.29
PUM3-202ENST00000397885 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 L1RE1Q9UN81 338 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 HNRNPH1P31943 449 aaKnown RBP13.24□□□□□ -0.29
PUM3-202ENST00000397885 TUBB2AQ13885 445 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 AOPEPQ8N6M6 819 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 MSANTD4Q8NCY6 345 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 TUBB2BQ9BVA1 445 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
PUM3-202ENST00000397885 FAN1Q9Y2M0 1017 aa13.24□□□□□ -0.29
PUM3-202ENST00000397885 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
PUM3-202ENST00000397885 FANCGO15287 622 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 DDR1Q08345 913 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 TTLL5Q6EMB2 1281 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 CAMKK2Q96RR4 588 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
PUM3-202ENST00000397885 ERCC3P19447 782 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
PUM3-202ENST00000397885 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
PUM3-202ENST00000397885 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
PUM3-202ENST00000397885 BCL9O00512 1426 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 EP400Q96L91 3159 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
PUM3-202ENST00000397885 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
PUM3-202ENST00000397885 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
PUM3-202ENST00000397885 JAKMIP1Q96N16 626 aaKnown RBP13.22□□□□□ -0.29
PUM3-202ENST00000397885 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 ARHGAP6O43182 974 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 C11orf91Q3C1V1 193 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 CCDC73Q6ZRK6 1079 aa13.22□□□□□ -0.29
PUM3-202ENST00000397885 GOLIM4O00461 696 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 PSMA5P28066 241 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 AMPHP49418 695 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 MCM6Q14566 821 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
PUM3-202ENST00000397885 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 GNL3LQ9NVN8 582 aaKnown RBP13.21□□□□□ -0.29
PUM3-202ENST00000397885 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
PUM3-202ENST00000397885 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 TMCO5BA8MYB1 307 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 RAB11FIP3O75154 756 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 IL2RBP14784 551 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.3
PUM3-202ENST00000397885 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 RESTQ13127 1097 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 CEP112Q8N8E3 955 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 JMYQ8N9B5 988 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 ENGASEQ8NFI3 743 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.3
PUM3-202ENST00000397885 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.3
PUM3-202ENST00000397885 RREB1Q92766 1687 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
PUM3-202ENST00000397885 CBFA2T2O43439 604 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 HOXC9P31274 260 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 NEDD9Q14511 834 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 GBP6Q6ZN66 633 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
PUM3-202ENST00000397885 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
PUM3-202ENST00000397885 KAT2BQ92831 832 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
PUM3-202ENST00000397885 MYO1BO43795 1136 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
PUM3-202ENST00000397885 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
PUM3-202ENST00000397885 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
PUM3-202ENST00000397885 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 SHOX2O60902 331 aaPredicted RBP13.19□□□□□ -0.3
PUM3-202ENST00000397885 GNG11P61952 73 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
PUM3-202ENST00000397885 PI4K2BQ8TCG2 481 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 MIEF2Q96C03 454 aa13.19□□□□□ -0.3
PUM3-202ENST00000397885 ANKZF1Q9H8Y5 726 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms