RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ABCF2Q9UG63 623 aa24.4■■□□□ 1.5
SNCA-203ENST00000394986 CRKP46108 304 aa24.39■■□□□ 1.5
SNCA-203ENST00000394986 NDUFB9Q9Y6M9 179 aa24.39■■□□□ 1.5
SNCA-203ENST00000394986 SPDYE2BA6NHP3 402 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 ADM5C9JUS6 153 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 IGHDP01880 384 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 LDHBP07195 334 aaKnown RBP24.38■■□□□ 1.49
SNCA-203ENST00000394986 SPDYE6P0CI01 402 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 USP48Q86UV5 1035 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 MTMR14Q8NCE2 650 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 ZNF512BQ96KM6 892 aaPredicted RBP24.38■■□□□ 1.49
SNCA-203ENST00000394986 PRMT6Q96LA8 375 aaPredicted RBP24.38■■□□□ 1.49
SNCA-203ENST00000394986 SERPINA10Q9UK55 444 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 SUGT1Q9Y2Z0 365 aa24.38■■□□□ 1.49
SNCA-203ENST00000394986 PASKQ96RG2 1323 aa24.37■■□□□ 1.49
SNCA-203ENST00000394986 ZAP70P43403 619 aa24.37■■□□□ 1.49
SNCA-203ENST00000394986 DIXDC1Q155Q3 683 aa24.37■■□□□ 1.49
SNCA-203ENST00000394986 DCPSQ96C86 337 aaKnown RBP24.37■■□□□ 1.49
SNCA-203ENST00000394986 MAST3O60307 1309 aa24.37■■□□□ 1.49
SNCA-203ENST00000394986 CLRN2A0PK11 232 aa24.36■■□□□ 1.49
SNCA-203ENST00000394986 KRT26Q7Z3Y9 468 aa24.36■■□□□ 1.49
SNCA-203ENST00000394986 TEKT1Q969V4 418 aa24.36■■□□□ 1.49
SNCA-203ENST00000394986 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
SNCA-203ENST00000394986 HSPA6P17066 643 aa24.35■■□□□ 1.49
SNCA-203ENST00000394986 ZGPATQ8N5A5 531 aaKnown RBP24.35■■□□□ 1.49
SNCA-203ENST00000394986 RWDD1Q9H446 243 aaPredicted RBP24.35■■□□□ 1.49
SNCA-203ENST00000394986 CDC37L1Q7L3B6 337 aa24.35■■□□□ 1.49
SNCA-203ENST00000394986 HTRA3P83110 453 aa24.34■■□□□ 1.49
SNCA-203ENST00000394986 HDLBPQ00341 1268 aaKnown RBP24.34■■□□□ 1.49
SNCA-203ENST00000394986 DZIP1Q86YF9 867 aaKnown RBP24.34■■□□□ 1.49
SNCA-203ENST00000394986 GCC1Q96CN9 775 aa24.34■■□□□ 1.49
SNCA-203ENST00000394986 TDRD3Q9H7E2 651 aaKnown RBP24.34■■□□□ 1.49
SNCA-203ENST00000394986 PIH1D3Q9NQM4 214 aaKnown RBP24.34■■□□□ 1.49
SNCA-203ENST00000394986 PITPNM2Q9BZ72 1349 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 APLP1P51693 650 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 SPTY2D1Q68D10 685 aaPredicted RBP24.33■■□□□ 1.49
SNCA-203ENST00000394986 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 SULF1Q8IWU6 871 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 OTUD7AQ8TE49 926 aaPredicted RBP24.33■■□□□ 1.49
SNCA-203ENST00000394986 ZNF384Q8TF68 577 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 ANTXR1Q9H6X2 564 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 RAI14Q9P0K7 980 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 DAGLAQ9Y4D2 1042 aa24.33■■□□□ 1.49
SNCA-203ENST00000394986 AKAP11Q9UKA4 1901 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 CENPBP07199 599 aaPredicted RBP24.32■■□□□ 1.48
SNCA-203ENST00000394986 MECOMQ03112 1051 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 TSHZ3Q63HK5 1081 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 APOBEC3HQ6NTF7 200 aaKnown RBP24.32■■□□□ 1.48
SNCA-203ENST00000394986 HHIPL2Q6UWX4 724 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 ZDHHC15Q96MV8 337 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 VEZTQ9HBM0 779 aa24.32■■□□□ 1.48
SNCA-203ENST00000394986 MYO1BO43795 1136 aa24.31■■□□□ 1.48
SNCA-203ENST00000394986 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
SNCA-203ENST00000394986 DNAJC2Q99543 621 aaKnown RBP24.31■■□□□ 1.48
SNCA-203ENST00000394986 MRIQ9BWK5 157 aa24.31■■□□□ 1.48
SNCA-203ENST00000394986 ZNF408Q9H9D4 720 aa24.31■■□□□ 1.48
SNCA-203ENST00000394986 LRP2BPQ9P2M1 347 aa24.31■■□□□ 1.48
SNCA-203ENST00000394986 ZNF70Q9UC06 446 aaPredicted RBP24.31■■□□□ 1.48
SNCA-203ENST00000394986 PRAMEF18Q5VWM3 479 aa24.3■■□□□ 1.48
SNCA-203ENST00000394986 SMC5Q8IY18 1101 aa24.3■■□□□ 1.48
SNCA-203ENST00000394986 BOLA2Q9H3K6 86 aa24.3■■□□□ 1.48
SNCA-203ENST00000394986 CACNB3P54284 484 aa24.29■■□□□ 1.48
SNCA-203ENST00000394986 SPDYE2Q495Y8 402 aa24.29■■□□□ 1.48
SNCA-203ENST00000394986 NSUN4Q96CB9 384 aaKnown RBP24.29■■□□□ 1.48
SNCA-203ENST00000394986 EDC3Q96F86 508 aaKnown RBP24.29■■□□□ 1.48
SNCA-203ENST00000394986 ATP5JP18859 108 aa24.28■■□□□ 1.48
SNCA-203ENST00000394986 APOBEC3FQ8IUX4 373 aaKnown RBP24.28■■□□□ 1.48
SNCA-203ENST00000394986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.28■■□□□ 1.48
SNCA-203ENST00000394986 CDCA5Q96FF9 252 aa24.28■■□□□ 1.48
SNCA-203ENST00000394986 ECHDC1Q9NTX5 307 aa24.28■■□□□ 1.48
SNCA-203ENST00000394986 CELF2O95319 508 aaKnown RBP24.27■■□□□ 1.48
SNCA-203ENST00000394986 CST9Q5W186 159 aa24.27■■□□□ 1.48
SNCA-203ENST00000394986 ZBTB47Q9UFB7 747 aaPredicted RBP24.27■■□□□ 1.48
SNCA-203ENST00000394986 MROH7-TTC4A0A0A0MT08 1334 aa24.27■■□□□ 1.48
SNCA-203ENST00000394986 GAKO14976 1311 aa24.27■■□□□ 1.48
SNCA-203ENST00000394986 GOLIM4O00461 696 aa24.27■■□□□ 1.48
SNCA-203ENST00000394986 IDH1O75874 414 aaKnown RBP24.27■■□□□ 1.48
SNCA-203ENST00000394986 LNPKQ9C0E8 428 aa24.27■■□□□ 1.48
SNCA-203ENST00000394986 TMEM88BA6NKF7 163 aa24.26■■□□□ 1.47
SNCA-203ENST00000394986 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
SNCA-203ENST00000394986 CDC42EP5Q6NZY7 148 aa24.26■■□□□ 1.47
SNCA-203ENST00000394986 DEFB129Q9H1M3 183 aa24.26■■□□□ 1.47
SNCA-203ENST00000394986 BTDP43251 543 aa24.25■■□□□ 1.47
SNCA-203ENST00000394986 GPATCH3Q96I76 525 aa24.25■■□□□ 1.47
SNCA-203ENST00000394986 HAUS7Q99871 368 aa24.25■■□□□ 1.47
SNCA-203ENST00000394986 POLR2AP24928 1970 aaKnown RBP24.24■■□□□ 1.47
SNCA-203ENST00000394986 SLF2Q8IX21 1173 aa24.24■■□□□ 1.47
SNCA-203ENST00000394986 FAM163AQ96GL9 167 aaPredicted RBP24.24■■□□□ 1.47
SNCA-203ENST00000394986 SALL3Q9BXA9 1300 aa24.24■■□□□ 1.47
SNCA-203ENST00000394986 ECM29Q5VYK3 1845 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 MX1P20591 662 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 GSTO1P78417 241 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 RASA3Q14644 834 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 NAA16Q6N069 864 aaPredicted RBP24.23■■□□□ 1.47
SNCA-203ENST00000394986 ADGRA1Q86SQ6 560 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 CDAN1Q8IWY9 1227 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 CREBZFQ9NS37 354 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 USP40Q9NVE5 1235 aa24.23■■□□□ 1.47
SNCA-203ENST00000394986 PAG1Q9NWQ8 432 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms