RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 H0YIN7 160 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 STX17P56962 302 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 PRAG1Q86YV5 1406 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CTAGE15A4D2H0 777 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CTAGE8P0CG41 777 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 HARSP12081 509 aaKnown RBP11.73□□□□□ -0.53
COL4A6-203ENST00000394872 LETM2Q2VYF4 491 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 DCAF17Q5H9S7 520 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CTAGE6Q86UF2 777 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC117Q8IWD4 279 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CTAGE4Q8IX94 777 aa11.73□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC63Q8NA47 563 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 CHMP2AO43633 222 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 NDC80O14777 642 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 VAMP4O75379 141 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 KRT83P78385 493 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 ATP2A1O14983 1001 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 PDE8AO60658 829 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 SYT1P21579 422 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 ZYXQ15942 572 aaKnown RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC65Q8IXS2 484 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 ARMT1Q9H993 441 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 GTPBP4Q9BZE4 634 aaKnown RBP11.72□□□□□ -0.53
COL4A6-203ENST00000394872 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
COL4A6-203ENST00000394872 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 SKILP12757 684 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 ZNF174Q15697 407 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 SV2BQ7L1I2 683 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC77Q9BR77 488 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 MAST3O60307 1309 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-203ENST00000394872 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-203ENST00000394872 A0A1W2PP64 1363 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 KRT5P13647 590 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 KIF5AQ12840 1032 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 CCDC42Q96M95 316 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
COL4A6-203ENST00000394872 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 FNBP1Q96RU3 617 aa11.71□□□□□ -0.53
COL4A6-203ENST00000394872 UGGT2Q9NYU1 1516 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 VWA3AA6NCI4 1184 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 CCT6AP40227 531 aaKnown RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 BMS1Q14692 1282 aaKnown RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 MAK16Q9BXY0 300 aaKnown RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 DNAI1Q9UI46 699 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 RAD50Q92878 1312 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.54
COL4A6-203ENST00000394872 BRDTQ58F21 947 aaPredicted RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 METTL22Q9BUU2 404 aaPredicted RBP11.71□□□□□ -0.54
COL4A6-203ENST00000394872 ABCC10Q5T3U5 1492 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 CTAGE9A4FU28 777 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 B4E1Z4 1266 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
COL4A6-203ENST00000394872 MXRA7P84157 204 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 WDR44Q5JSH3 913 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
COL4A6-203ENST00000394872 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 BIRC3Q13489 604 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 IQUBQ8NA54 791 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 KRT86O43790 486 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
COL4A6-203ENST00000394872 EPB41P11171 864 aaKnown RBP11.7□□□□□ -0.54
COL4A6-203ENST00000394872 TIMM10P62072 90 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 PRKG1Q13976 671 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 EYA2O00167 538 aa11.7□□□□□ -0.54
COL4A6-203ENST00000394872 MYCLP12524 364 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-203ENST00000394872 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
COL4A6-203ENST00000394872 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 ATP2C2O75185 946 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 SMTNP53814 917 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
COL4A6-203ENST00000394872 STMN4Q9H169 189 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 774.5 ms