RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 GPAA1O43292 621 aa16.39■□□□□ 0.21
TNFSF13-203ENST00000380535 ATP2B4P23634 1241 aa16.39■□□□□ 0.21
TNFSF13-203ENST00000380535 PDE6BP35913 854 aa16.39■□□□□ 0.21
TNFSF13-203ENST00000380535 ALX1Q15699 326 aa16.39■□□□□ 0.21
TNFSF13-203ENST00000380535 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
TNFSF13-203ENST00000380535 TCRBV5S4A2TA0A5A2 114 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 CYP21A2P08686 494 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 PKP1Q13835 747 aa16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-203ENST00000380535 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 GYG1P46976 350 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 MRE11P49959 708 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 ZNF804AQ7Z570 1209 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
TNFSF13-203ENST00000380535 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 NPR1P16066 1061 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 BAG6P46379 1132 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 ZDHHC9Q9Y397 364 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 CCDC88AQ3V6T2 1871 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 SNAP23O00161 211 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 DHX32Q7L7V1 743 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
TNFSF13-203ENST00000380535 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
TNFSF13-203ENST00000380535 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
TNFSF13-203ENST00000380535 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
TNFSF13-203ENST00000380535 IRS2Q9Y4H2 1338 aa16.35■□□□□ 0.21
TNFSF13-203ENST00000380535 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 ZNF213O14771 459 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 CHGBP05060 677 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 CPA1P15085 419 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 GGA1Q9UJY5 639 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 FGAP02671 866 aa16.34■□□□□ 0.21
TNFSF13-203ENST00000380535 E7EWF7 191 aa16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 SETQ01105 290 aaPredicted RBP16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 CERS3Q8IU89 383 aa16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 MMP10P09238 476 aa16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
TNFSF13-203ENST00000380535 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 TRDNQ13061 729 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 NCOA7Q8NI08 942 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 MASTLQ96GX5 879 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
TNFSF13-203ENST00000380535 BRD1O95696 1058 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 SRGNP10124 158 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 CYP7A1P22680 504 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 NAA16Q6N069 864 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 CLGNO14967 610 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 MBD4O95243 580 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 APPP05067 770 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 GSTO1P78417 241 aa16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 EXOSC10Q01780 885 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-203ENST00000380535 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 FOXP2O15409 715 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 MCM5P33992 734 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 GPSM2P81274 684 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 NAPBQ9H115 298 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 TAF6LQ9Y6J9 622 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 UFL1O94874 794 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms