RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 WNT10BO00744 389 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 IGSF3O75054 1194 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 CFAP100Q494V2 611 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 B4GALNT3Q6L9W6 998 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 CHADLQ6NUI6 762 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 CHD1LQ86WJ1 897 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 ABCF2Q9UG63 623 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
SSU72-203ENST00000378725 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 CRKP46108 304 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 DLGAP5Q15398 846 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 HHIPL2Q6UWX4 724 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 SMC1BQ8NDV3 1235 aa22.87■■□□□ 1.25
SSU72-203ENST00000378725 FSTL1Q12841 308 aa22.86■■□□□ 1.25
SSU72-203ENST00000378725 NBPF9Q3BBW0 867 aa22.86■■□□□ 1.25
SSU72-203ENST00000378725 ERICH6BQ5W0A0 696 aa22.86■■□□□ 1.25
SSU72-203ENST00000378725 OTUD7AQ8TE49 926 aaPredicted RBP22.86■■□□□ 1.25
SSU72-203ENST00000378725 PRMT6Q96LA8 375 aaPredicted RBP22.86■■□□□ 1.25
SSU72-203ENST00000378725 PCDHAC2Q9Y5I4 1007 aa22.86■■□□□ 1.25
SSU72-203ENST00000378725 TTC41PQ6P2S7 1318 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 AKAP11Q9UKA4 1901 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 MYH13Q9UKX3 1938 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 SPDYE2BA6NHP3 402 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 SPDYE6P0CI01 402 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 TEKT1Q969V4 418 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 ZDHHC15Q96MV8 337 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 HAUS7Q99871 368 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 LNPKQ9C0E8 428 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 BOLA2Q9H3K6 86 aa22.85■■□□□ 1.25
SSU72-203ENST00000378725 PIH1D3Q9NQM4 214 aaKnown RBP22.85■■□□□ 1.25
SSU72-203ENST00000378725 FAM163AQ96GL9 167 aaPredicted RBP22.84■■□□□ 1.25
SSU72-203ENST00000378725 ANTXR1Q9H6X2 564 aa22.84■■□□□ 1.25
SSU72-203ENST00000378725 LRP2BPQ9P2M1 347 aa22.84■■□□□ 1.25
SSU72-203ENST00000378725 STAP2Q9UGK3 403 aa22.84■■□□□ 1.25
SSU72-203ENST00000378725 NDUFB9Q9Y6M9 179 aa22.84■■□□□ 1.25
SSU72-203ENST00000378725 ASTN2O75129 1339 aaPredicted RBP22.83■■□□□ 1.25
SSU72-203ENST00000378725 MX1P20591 662 aa22.83■■□□□ 1.25
SSU72-203ENST00000378725 RBM5P52756 815 aaKnown RBP eCLIP22.83■■□□□ 1.25
SSU72-203ENST00000378725 MECOMQ03112 1051 aa22.83■■□□□ 1.25
SSU72-203ENST00000378725 TTF1Q15361 905 aaPredicted RBP22.83■■□□□ 1.25
SSU72-203ENST00000378725 MAP1SQ66K74 1059 aaPredicted RBP22.83■■□□□ 1.25
SSU72-203ENST00000378725 CNTROBQ8N137 903 aa22.83■■□□□ 1.25
SSU72-203ENST00000378725 ZNF384Q8TF68 577 aa22.83■■□□□ 1.25
SSU72-203ENST00000378725 NSUN4Q96CB9 384 aaKnown RBP22.83■■□□□ 1.25
SSU72-203ENST00000378725 ITGBL1O95965 494 aaPredicted RBP22.82■■□□□ 1.24
SSU72-203ENST00000378725 DIXDC1Q155Q3 683 aa22.82■■□□□ 1.24
SSU72-203ENST00000378725 ANGEL2Q5VTE6 544 aaKnown RBP22.82■■□□□ 1.24
SSU72-203ENST00000378725 APOBEC3HQ6NTF7 200 aaKnown RBP22.82■■□□□ 1.24
SSU72-203ENST00000378725 DZIP1Q86YF9 867 aaKnown RBP22.82■■□□□ 1.24
SSU72-203ENST00000378725 SLF2Q8IX21 1173 aa22.82■■□□□ 1.24
SSU72-203ENST00000378725 RAI14Q9P0K7 980 aa22.82■■□□□ 1.24
SSU72-203ENST00000378725 PITPNM2Q9BZ72 1349 aa22.82■■□□□ 1.24
SSU72-203ENST00000378725 PI4K2BQ8TCG2 481 aa22.81■■□□□ 1.24
SSU72-203ENST00000378725 DCPSQ96C86 337 aaKnown RBP22.81■■□□□ 1.24
SSU72-203ENST00000378725 DNAJC2Q99543 621 aaKnown RBP22.81■■□□□ 1.24
SSU72-203ENST00000378725 GGA3Q9NZ52 723 aa22.81■■□□□ 1.24
SSU72-203ENST00000378725 DAGLAQ9Y4D2 1042 aa22.81■■□□□ 1.24
SSU72-203ENST00000378725 GAKO14976 1311 aa22.81■■□□□ 1.24
SSU72-203ENST00000378725 GOLIM4O00461 696 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 ERC2O15083 957 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 MYO1BO43795 1136 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 GLRX3O76003 335 aaKnown RBP22.8■■□□□ 1.24
SSU72-203ENST00000378725 PDE1AP54750 535 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 GSTO1P78417 241 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 TSHZ3Q63HK5 1081 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 CDC37L1Q7L3B6 337 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 PAG1Q9NWQ8 432 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 AOX1Q06278 1338 aa22.8■■□□□ 1.24
SSU72-203ENST00000378725 LDHCP07864 332 aa22.79■■□□□ 1.24
SSU72-203ENST00000378725 C1QTNF8P60827 252 aa22.79■■□□□ 1.24
SSU72-203ENST00000378725 TMED8Q6PL24 325 aaPredicted RBP22.79■■□□□ 1.24
SSU72-203ENST00000378725 EDC3Q96F86 508 aaKnown RBP22.79■■□□□ 1.24
SSU72-203ENST00000378725 MAP3K12Q12852 859 aa22.78■■□□□ 1.24
SSU72-203ENST00000378725 SPDYE2Q495Y8 402 aa22.78■■□□□ 1.24
SSU72-203ENST00000378725 CENPQQ7L2Z9 268 aaPredicted RBP22.78■■□□□ 1.24
SSU72-203ENST00000378725 PLEKHM2Q8IWE5 1019 aa22.78■■□□□ 1.24
SSU72-203ENST00000378725 OSBPL3Q9H4L5 887 aa22.78■■□□□ 1.24
SSU72-203ENST00000378725 TDRD3Q9H7E2 651 aaKnown RBP22.78■■□□□ 1.24
SSU72-203ENST00000378725 ZNF70Q9UC06 446 aaPredicted RBP22.78■■□□□ 1.24
SSU72-203ENST00000378725 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
SSU72-203ENST00000378725 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
SSU72-203ENST00000378725 IDH1O75874 414 aaKnown RBP22.77■■□□□ 1.24
SSU72-203ENST00000378725 NAA16Q6N069 864 aaPredicted RBP22.77■■□□□ 1.24
SSU72-203ENST00000378725 KRT26Q7Z3Y9 468 aa22.77■■□□□ 1.24
SSU72-203ENST00000378725 USP48Q86UV5 1035 aa22.77■■□□□ 1.24
SSU72-203ENST00000378725 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
SSU72-203ENST00000378725 GLIS2Q9BZE0 524 aaPredicted RBP22.77■■□□□ 1.24
SSU72-203ENST00000378725 PASKQ96RG2 1323 aa22.77■■□□□ 1.24
SSU72-203ENST00000378725 CLRN2A0PK11 232 aa22.76■■□□□ 1.23
SSU72-203ENST00000378725 APOBEC3FQ8IUX4 373 aaKnown RBP22.76■■□□□ 1.23
SSU72-203ENST00000378725 SULF1Q8IWU6 871 aa22.76■■□□□ 1.23
SSU72-203ENST00000378725 PDE4AP27815 886 aa22.75■■□□□ 1.23
SSU72-203ENST00000378725 CDC42EP5Q6NZY7 148 aa22.75■■□□□ 1.23
SSU72-203ENST00000378725 ADM5C9JUS6 153 aa22.74■■□□□ 1.23
SSU72-203ENST00000378725 MAGEB6Q8N7X4 407 aa22.74■■□□□ 1.23
SSU72-203ENST00000378725 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
SSU72-203ENST00000378725 TRAF5O00463 557 aa22.73■■□□□ 1.23
SSU72-203ENST00000378725 MAP4K4O95819 1239 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms