RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 CCDC174Q6PII3 467 aa17.55■□□□□ 0.4
OTUD3-201ENST00000375120 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
OTUD3-201ENST00000375120 ZSCAN26Q16670 478 aa17.55■□□□□ 0.4
OTUD3-201ENST00000375120 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
OTUD3-201ENST00000375120 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
OTUD3-201ENST00000375120 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
OTUD3-201ENST00000375120 ERCC6LQ2NKX8 1250 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 LONRF3Q496Y0 759 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
OTUD3-201ENST00000375120 RTL9Q8NET4 1388 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
OTUD3-201ENST00000375120 CEP83Q9Y592 693 aa17.54■□□□□ 0.4
OTUD3-201ENST00000375120 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
OTUD3-201ENST00000375120 MTRF1LQ9UGC7 380 aaKnown RBP17.54■□□□□ 0.4
OTUD3-201ENST00000375120 ZNF202O95125 648 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 SAMM50Q9Y512 469 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 MRVI1Q9Y6F6 885 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 CALML3P27482 149 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 GNAQP50148 359 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
OTUD3-201ENST00000375120 MTX1Q13505 466 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 TRIM14Q14142 442 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 XPO4Q9C0E2 1151 aaKnown RBP17.53■□□□□ 0.4
OTUD3-201ENST00000375120 GOLGA6BA6NDN3 693 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 GJC1P36383 396 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 ZNF174Q15697 407 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
OTUD3-201ENST00000375120 SETDB1Q15047 1291 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 SMC6Q96SB8 1091 aa17.53■□□□□ 0.4
OTUD3-201ENST00000375120 AOX1Q06278 1338 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 TBC1D8BQ0IIM8 1120 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 GSTA5Q7RTV2 222 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 TRIM35Q9UPQ4 493 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
OTUD3-201ENST00000375120 VIMP08670 466 aaKnown RBP17.52■□□□□ 0.4
OTUD3-201ENST00000375120 CALM1P0DP23 149 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 CALM2P0DP24 149 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 CALM3P0DP25 149 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 UTP14CQ5TAP6 766 aaKnown RBP17.52■□□□□ 0.4
OTUD3-201ENST00000375120 NFE2L3Q9Y4A8 694 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 KRT79Q5XKE5 535 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
OTUD3-201ENST00000375120 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 SYNRGQ9UMZ2 1314 aa17.52■□□□□ 0.4
OTUD3-201ENST00000375120 RILPL1Q5EBL4 403 aa17.52■□□□□ 0.39
OTUD3-201ENST00000375120 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.39
OTUD3-201ENST00000375120 DTHD1Q6ZMT9 781 aa17.52■□□□□ 0.39
OTUD3-201ENST00000375120 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
OTUD3-201ENST00000375120 JAK2O60674 1132 aa17.51■□□□□ 0.39
OTUD3-201ENST00000375120 GSPT1P15170 499 aaKnown RBP17.51■□□□□ 0.39
OTUD3-201ENST00000375120 RNASE9P60153 205 aaKnown RBP17.51■□□□□ 0.39
OTUD3-201ENST00000375120 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
OTUD3-201ENST00000375120 CLNS1AP54105 237 aaKnown RBP17.51■□□□□ 0.39
OTUD3-201ENST00000375120 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
OTUD3-201ENST00000375120 MKRN1Q9UHC7 482 aaKnown RBP17.51■□□□□ 0.39
OTUD3-201ENST00000375120 ATP2A1O14983 1001 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
OTUD3-201ENST00000375120 PPARDQ03181 441 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 C6orf50Q9HD87 102 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 MAPK8IP1Q9UQF2 711 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 MLKLQ8NB16 471 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 GPR161Q8N6U8 529 aaKnown RBP17.5■□□□□ 0.39
OTUD3-201ENST00000375120 MIGA1Q8NAN2 632 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
OTUD3-201ENST00000375120 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 TMTC1Q8IUR5 882 aa17.5■□□□□ 0.39
OTUD3-201ENST00000375120 PPP1R7Q15435 360 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 PYCARDQ9ULZ3 195 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 ZFYVE9O95405 1425 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 CCDC50Q8IVM0 306 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 SECISBP2LQ93073 1101 aaKnown RBP17.49■□□□□ 0.39
OTUD3-201ENST00000375120 GDAP1L1Q96MZ0 367 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
OTUD3-201ENST00000375120 BICD1Q96G01 975 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 STIM2Q9P246 746 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 DMTNQ08495 405 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 CCDC26Q8TAB7 109 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 CUTAO60888 179 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 RAPGEF1Q13905 1077 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
OTUD3-201ENST00000375120 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
OTUD3-201ENST00000375120 MAGEB6P1A0A0J9YX57 407 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 A6NNZ2 444 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 EEF2P13639 858 aaKnown RBP17.48■□□□□ 0.39
OTUD3-201ENST00000375120 ARHGAP25P42331 645 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 TUBB8Q3ZCM7 444 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 INTS8Q75QN2 995 aaKnown RBP17.48■□□□□ 0.39
OTUD3-201ENST00000375120 TSNARE1Q96NA8 513 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 GNAT2P19087 354 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 SLF1Q9BQI6 1058 aa17.48■□□□□ 0.39
OTUD3-201ENST00000375120 KRT9P35527 623 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms