RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 GIMAP6Q6P9H5 292 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 IFT81Q8WYA0 676 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 RPAINQ86UA6 219 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 SLMAPQ14BN4 828 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 TTF2Q9UNY4 1162 aaKnown RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 PPP4R1Q8TF05 950 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 ARHGEF2Q92974 986 aaKnown RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 AFMP43652 599 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-203ENST00000374695 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 AGTPBP1Q9UPW5 1226 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 GOLGA6BA6NDN3 693 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 CYP26C1Q6V0L0 522 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 STX10O60499 249 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC122Q5T0U0 273 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
HSPG2-203ENST00000374695 SMARCA5O60264 1052 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NAPGQ99747 312 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 IL16Q14005 1332 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 PTGS1P23219 599 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 CFAP70Q5T0N1 1121 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 SLC12A5Q9H2X9 1139 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NUP58Q9BVL2 599 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NPHP3Q7Z494 1330 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 P3H4Q92791 437 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 RPGRIP1Q96KN7 1286 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NOX5Q96PH1 765 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NESP48681 1621 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 MICAL3Q7RTP6 2002 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 LIN9Q5TKA1 542 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 NAPAP54920 295 aa9.36□□□□□ -0.91
HSPG2-203ENST00000374695 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 BAG1Q99933 345 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-203ENST00000374695 SMIM23A6NLE4 172 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 KRT79Q5XKE5 535 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 PLCG2P16885 1265 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 EIF2AQ9BY44 585 aaKnown RBP9.35□□□□□ -0.91
HSPG2-203ENST00000374695 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 ARID5AQ03989 594 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 IQUBQ8NA54 791 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 GOLGA8QA0A0J9YX86 632 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 GOLGA8OA6NCC3 632 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 GOLGA8NF8WBI6 632 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CNNM4Q6P4Q7 775 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 NOC2LQ9Y3T9 749 aaKnown RBP9.35□□□□□ -0.91
HSPG2-203ENST00000374695 SPTLC2O15270 562 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 ZNF500O60304 480 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 LZTFL1Q9NQ48 299 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 CNPY2Q9Y2B0 182 aa9.35□□□□□ -0.91
HSPG2-203ENST00000374695 HPDP32754 393 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-203ENST00000374695 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 DRC3Q9H069 523 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 RAB17Q9H0T7 212 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 MUM1L1Q5H9M0 696 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 RRP36Q96EU6 259 aaKnown RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 IMPACTQ9P2X3 320 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 TROQ12816 1431 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 RHOXF2BP0C7M4 288 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 RHOXF2Q9BQY4 288 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 TRMT112Q9UI30 125 aaKnown RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 MUM1Q2TAK8 710 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 RLBP1P12271 317 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 PDE1CQ14123 709 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC89Q8N998 374 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 INTS4Q96HW7 963 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms