RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 USP50Q70EL3 339 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-201ENST00000374673 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 PNMA8AQ86V59 439 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-201ENST00000374673 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 HAUS7Q99871 368 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 MRIQ9BWK5 157 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
HSPG2-201ENST00000374673 MYH7P12883 1935 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 GLRX3O76003 335 aaKnown RBP18.29■□□□□ 0.52
HSPG2-201ENST00000374673 PDE1AP54750 535 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 TSHZ3Q63HK5 1081 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 TBC1D9Q6ZT07 1266 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 SAMD7Q7Z3H4 446 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 TRPM4Q8TD43 1214 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 SERPINA10Q9UK55 444 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
HSPG2-201ENST00000374673 AOX1Q06278 1338 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 EGFRP00533 1210 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-201ENST00000374673 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-201ENST00000374673 PLEKHM2Q8IWE5 1019 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 MTMR14Q8NCE2 650 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
HSPG2-201ENST00000374673 OSBPL3Q9H4L5 887 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
HSPG2-201ENST00000374673 PIH1D3Q9NQM4 214 aaKnown RBP18.28■□□□□ 0.52
HSPG2-201ENST00000374673 PDE4AP27815 886 aa18.27■□□□□ 0.52
HSPG2-201ENST00000374673 CRKP46108 304 aa18.27■□□□□ 0.52
HSPG2-201ENST00000374673 HIRAP54198 1017 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-201ENST00000374673 HHIPL2Q6UWX4 724 aa18.27■□□□□ 0.52
HSPG2-201ENST00000374673 ZBED3Q96IU2 234 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-201ENST00000374673 PAG1Q9NWQ8 432 aa18.27■□□□□ 0.52
HSPG2-201ENST00000374673 LRP2BPQ9P2M1 347 aa18.27■□□□□ 0.52
HSPG2-201ENST00000374673 GOLIM4O00461 696 aa18.26■□□□□ 0.51
HSPG2-201ENST00000374673 CFAP100Q494V2 611 aa18.26■□□□□ 0.51
HSPG2-201ENST00000374673 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
HSPG2-201ENST00000374673 DZIP1Q86YF9 867 aaKnown RBP18.26■□□□□ 0.51
HSPG2-201ENST00000374673 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
HSPG2-201ENST00000374673 NSUN4Q96CB9 384 aaKnown RBP18.26■□□□□ 0.51
HSPG2-201ENST00000374673 RAI14Q9P0K7 980 aa18.26■□□□□ 0.51
HSPG2-201ENST00000374673 WNT10BO00744 389 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 MECOMQ03112 1051 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 DLGAP5Q15398 846 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-201ENST00000374673 LDHDQ86WU2 507 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 ZNF384Q8TF68 577 aa18.25■□□□□ 0.51
HSPG2-201ENST00000374673 ZC3H15Q8WU90 426 aaKnown RBP18.25■□□□□ 0.51
HSPG2-201ENST00000374673 EDC3Q96F86 508 aaKnown RBP18.25■□□□□ 0.51
HSPG2-201ENST00000374673 GAKO14976 1311 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 SPDYE2BA6NHP3 402 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 POTEJP0CG39 1038 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 SPDYE6P0CI01 402 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 RBM5P52756 815 aaKnown RBP eCLIP18.24■□□□□ 0.51
HSPG2-201ENST00000374673 DIXDC1Q155Q3 683 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 TMED8Q6PL24 325 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-201ENST00000374673 FAM163AQ96GL9 167 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-201ENST00000374673 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
HSPG2-201ENST00000374673 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 POLR2AP24928 1970 aaKnown RBP18.23■□□□□ 0.51
HSPG2-201ENST00000374673 IDH1O75874 414 aaKnown RBP18.23■□□□□ 0.51
HSPG2-201ENST00000374673 GSTO1P78417 241 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 MAP3K12Q12852 859 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 PRMT6Q96LA8 375 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-201ENST00000374673 DAGLAQ9Y4D2 1042 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 PCDHAC2Q9Y5I4 1007 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
HSPG2-201ENST00000374673 TOMM70O94826 608 aa18.22■□□□□ 0.51
HSPG2-201ENST00000374673 LDHCP07864 332 aa18.22■□□□□ 0.51
HSPG2-201ENST00000374673 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
HSPG2-201ENST00000374673 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
HSPG2-201ENST00000374673 MYO1BO43795 1136 aa18.21■□□□□ 0.51
HSPG2-201ENST00000374673 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
HSPG2-201ENST00000374673 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
HSPG2-201ENST00000374673 RBM46Q8TBY0 533 aaKnown RBP18.21■□□□□ 0.51
HSPG2-201ENST00000374673 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
HSPG2-201ENST00000374673 MAP4K4O95819 1239 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-201ENST00000374673 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
HSPG2-201ENST00000374673 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
HSPG2-201ENST00000374673 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■■■■□ 21.5
HSPG2-201ENST00000374673 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
HSPG2-201ENST00000374673 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
HSPG2-201ENST00000374673 GPR75-ASB3A0A0A6YYF3 556 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 PDE6AP16499 860 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 ANGEL2Q5VTE6 544 aaKnown RBP18.19■□□□□ 0.5
HSPG2-201ENST00000374673 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 CDK5RAP2Q96SN8 1893 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 TDRD3Q9H7E2 651 aaKnown RBP18.19■□□□□ 0.5
HSPG2-201ENST00000374673 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
HSPG2-201ENST00000374673 CYP7A1P22680 504 aa18.18■□□□□ 0.5
HSPG2-201ENST00000374673 ADD2P35612 726 aa18.18■□□□□ 0.5
HSPG2-201ENST00000374673 BTDP43251 543 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms