RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 C21orf2O43822 256 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 STOX1Q6ZVD7 989 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 OSBP2Q969R2 916 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 PPP1R9BQ96SB3 815 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
HMGCL-202ENST00000374487 ANKRD36CQ5JPF3 1778 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-202ENST00000374487 M0R2C6 588 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 ZAP70P43403 619 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 CDC37L1Q7L3B6 337 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 FERMT3Q86UX7 667 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 TTLL6Q8N841 843 aa14.27□□□□□ -0.12
HMGCL-202ENST00000374487 E7EWF7 191 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 PRELPP51888 382 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 KRT85P78386 507 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 SCARF1Q14162 830 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
HMGCL-202ENST00000374487 ESPNB1AK53 854 aa14.26□□□□□ -0.13
HMGCL-202ENST00000374487 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-202ENST00000374487 RASSF7Q02833 373 aa14.26□□□□□ -0.13
HMGCL-202ENST00000374487 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
HMGCL-202ENST00000374487 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
HMGCL-202ENST00000374487 RNF214Q8ND24 703 aa14.26□□□□□ -0.13
HMGCL-202ENST00000374487 MASTLQ96GX5 879 aa14.26□□□□□ -0.13
HMGCL-202ENST00000374487 COL4A1P02462 1669 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 SLX4Q8IY92 1834 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 H3BQV1 296 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 GRIN3BO60391 1043 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 JAK2O60674 1132 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 PDE8BO95263 885 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 CRY2Q49AN0 593 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 IFFO2Q5TF58 517 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 APPBP2Q92624 585 aa14.25□□□□□ -0.13
HMGCL-202ENST00000374487 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
HMGCL-202ENST00000374487 YY1P25490 414 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 IMMTQ16891 758 aaKnown RBP14.24□□□□□ -0.13
HMGCL-202ENST00000374487 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 TTLL5Q6EMB2 1281 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 ZSCAN25Q6NSZ9 544 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 PFKFB2O60825 505 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 NPR1P16066 1061 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 MCAMP43121 646 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
HMGCL-202ENST00000374487 APOBRQ0VD83 1088 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 SCRN1Q12765 414 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 TTF1Q15361 905 aaPredicted RBP14.24□□□□□ -0.13
HMGCL-202ENST00000374487 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 NLRP3Q96P20 1036 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 LLPHQ9BRT6 129 aaKnown RBP14.24□□□□□ -0.13
HMGCL-202ENST00000374487 CACNA1SQ13698 1873 aa14.24□□□□□ -0.13
HMGCL-202ENST00000374487 FAM173BQ6P4H8 233 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
HMGCL-202ENST00000374487 DLEC1Q9Y238 1755 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 FGAP02671 866 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 CHST3Q7LGC8 479 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 VGLL2Q8N8G2 317 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 C7orf43Q8WVR3 580 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
HMGCL-202ENST00000374487 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 ZNF512BQ96KM6 892 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-202ENST00000374487 SCAND2PQ9GZW5 306 aaPredicted RBP14.23□□□□□ -0.13
HMGCL-202ENST00000374487 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 TCHHQ07283 1943 aa14.23□□□□□ -0.13
HMGCL-202ENST00000374487 TAF1P21675 1872 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 NFKBIEO00221 500 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 CLCN1P35523 988 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 HAND2P61296 217 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
HMGCL-202ENST00000374487 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
HMGCL-202ENST00000374487 UQCRFS1P1P0C7P4 283 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
HMGCL-202ENST00000374487 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 HELBQ8NG08 1087 aaPredicted RBP14.22□□□□□ -0.13
HMGCL-202ENST00000374487 LPIN2Q92539 896 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 CNKSR1Q969H4 720 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 AGXT2Q9BYV1 514 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
HMGCL-202ENST00000374487 TFIP11Q9UBB9 837 aaKnown RBP14.22□□□□□ -0.13
HMGCL-202ENST00000374487 DDX60Q8IY21 1712 aaKnown RBP14.21□□□□□ -0.13
HMGCL-202ENST00000374487 ZNF213O14771 459 aa14.21□□□□□ -0.13
HMGCL-202ENST00000374487 GPAA1O43292 621 aa14.21□□□□□ -0.13
HMGCL-202ENST00000374487 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
HMGCL-202ENST00000374487 TTC6Q86TZ1 520 aa14.21□□□□□ -0.13
HMGCL-202ENST00000374487 ZNF274Q96GC6 653 aaPredicted RBP14.21□□□□□ -0.13
HMGCL-202ENST00000374487 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 SMARCC2Q8TAQ2 1214 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 CELF1Q92879 486 aaKnown RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 ZSCAN16Q9H4T2 348 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms