RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NBPF6Q5VWK0 638 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
LRRC40-201ENST00000370952 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 RABGGTAQ92696 567 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 NBPF4Q96M43 638 aa11.13□□□□□ -0.63
LRRC40-201ENST00000370952 MTF1Q14872 753 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 EFCC1Q9HA90 598 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 PTPRUQ92729 1446 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 GOLIM4O00461 696 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 YEATS4O95619 227 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
LRRC40-201ENST00000370952 SYKP43405 635 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
LRRC40-201ENST00000370952 PHACTR2O75167 634 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 TXLNAP40222 546 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 HAND2P61296 217 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 ABTB2Q8N961 1025 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 AGXT2Q9BYV1 514 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 MRPL44Q9H9J2 332 aaKnown RBP11.11□□□□□ -0.63
LRRC40-201ENST00000370952 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 MAP2K7O14733 419 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 MYL6BP14649 208 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 CDC27P30260 824 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 PDE4BQ07343 736 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
LRRC40-201ENST00000370952 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
LRRC40-201ENST00000370952 CCDC151A5D8V7 595 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 CMA1P23946 247 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 TC2NQ8N9U0 490 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 ZNF274Q96GC6 653 aaPredicted RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 CLIC6Q96NY7 704 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 PNKPQ96T60 521 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 MYD88Q99836 296 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 PSD3Q9NYI0 1048 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 FOXN1O15353 648 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 KBTBD3Q8NAB2 608 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 HAUS7Q99871 368 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 ANKZF1Q9H8Y5 726 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 UTYO14607 1347 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 ADAMTS13Q76LX8 1427 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
LRRC40-201ENST00000370952 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
LRRC40-201ENST00000370952 MED1Q15648 1581 aaPredicted RBP11.09□□□□□ -0.63
LRRC40-201ENST00000370952 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
LRRC40-201ENST00000370952 RHOXF2BP0C7M4 288 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
LRRC40-201ENST00000370952 KIF23Q02241 960 aaPredicted RBP11.09□□□□□ -0.63
LRRC40-201ENST00000370952 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 PACS2Q86VP3 889 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 RHOXF2Q9BQY4 288 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 ABCB6Q9NP58 842 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 NEURL1BA8MQ27 555 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 BMP6P22004 513 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 BRD3Q15059 726 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
LRRC40-201ENST00000370952 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
LRRC40-201ENST00000370952 GOLGA6L9A6NEM1 432 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 CPLX1O14810 134 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 STX10O60499 249 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 CUTAO60888 179 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
LRRC40-201ENST00000370952 GCKRQ14397 625 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 SRGAP1Q7Z6B7 1085 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 IQUBQ8NA54 791 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 DIP2BQ9P265 1576 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 LTKP29376 864 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 ICE2Q659A1 982 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 STK11IPQ8N1F8 1099 aa11.08□□□□□ -0.64
LRRC40-201ENST00000370952 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms