RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 GPR162Q16538 588 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 COL4A5P29400 1685 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 RAD17O75943 681 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
BRCC3-204ENST00000369462 CERS5Q8N5B7 392 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 APPBP2Q92624 585 aa13.19□□□□□ -0.3
BRCC3-204ENST00000369462 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
BRCC3-204ENST00000369462 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 NAA16Q6N069 864 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-204ENST00000369462 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
BRCC3-204ENST00000369462 CYP7A1P22680 504 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-204ENST00000369462 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
BRCC3-204ENST00000369462 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
BRCC3-204ENST00000369462 MAST3O60307 1309 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 REC8O95072 547 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 M0R2C6 588 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 LMNB1P20700 586 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 CXCL9Q07325 125 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
BRCC3-204ENST00000369462 RAD50Q92878 1312 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 PSMD14O00487 310 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 KIAA0825Q8IV33 1275 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
BRCC3-204ENST00000369462 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
BRCC3-204ENST00000369462 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
BRCC3-204ENST00000369462 MYH7P12883 1935 aa13.15□□□□□ -0.3
BRCC3-204ENST00000369462 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
BRCC3-204ENST00000369462 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
BRCC3-204ENST00000369462 GPAA1O43292 621 aa13.15□□□□□ -0.3
BRCC3-204ENST00000369462 VIL1P09327 827 aaKnown RBP13.15□□□□□ -0.3
BRCC3-204ENST00000369462 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
BRCC3-204ENST00000369462 IGSF3O75054 1194 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 MBD4O95243 580 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 SCNN1DP51172 638 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 GSTO1P78417 241 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
BRCC3-204ENST00000369462 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
BRCC3-204ENST00000369462 FZD9O00144 591 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 PTH1RQ03431 593 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 ARMT1Q9H993 441 aa13.14□□□□□ -0.31
BRCC3-204ENST00000369462 MAGEB6P1A0A0J9YX57 407 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 LDHCP07864 332 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
BRCC3-204ENST00000369462 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-204ENST00000369462 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
BRCC3-204ENST00000369462 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
BRCC3-204ENST00000369462 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 TNIP1Q15025 636 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 LCORLQ8N3X6 602 aa13.13□□□□□ -0.31
BRCC3-204ENST00000369462 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
BRCC3-204ENST00000369462 DYNLL1P63167 89 aaKnown RBP13.12□□□□□ -0.31
BRCC3-204ENST00000369462 MYO3BQ8WXR4 1341 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
BRCC3-204ENST00000369462 GMLQ99445 158 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
BRCC3-204ENST00000369462 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-204ENST00000369462 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 DAGLAQ9Y4D2 1042 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
BRCC3-204ENST00000369462 APPP05067 770 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
BRCC3-204ENST00000369462 ZNF541Q9H0D2 1346 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 PRKAB2O43741 272 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 BAG3O95817 575 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 BTDP43251 543 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
BRCC3-204ENST00000369462 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
BRCC3-204ENST00000369462 GAKO14976 1311 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 GPR75-ASB3A0A0A6YYF3 556 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 CRKP46108 304 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms