RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 PRDX5P30044 214 aa22.83■■□□□ 1.25
LMNA-204ENST00000368298 SPTY2D1Q68D10 685 aaPredicted RBP22.83■■□□□ 1.25
LMNA-204ENST00000368298 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.25
LMNA-204ENST00000368298 HSPA6P17066 643 aa22.82■■□□□ 1.24
LMNA-204ENST00000368298 ATP5JP18859 108 aa22.82■■□□□ 1.24
LMNA-204ENST00000368298 DLGAP5Q15398 846 aa22.82■■□□□ 1.24
LMNA-204ENST00000368298 HHIPL2Q6UWX4 724 aa22.82■■□□□ 1.24
LMNA-204ENST00000368298 SPDYE2BA6NHP3 402 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 ITGBL1O95965 494 aaPredicted RBP22.81■■□□□ 1.24
LMNA-204ENST00000368298 SPDYE6P0CI01 402 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 NBPF9Q3BBW0 867 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 ANKRD45Q5TZF3 282 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 CNTROBQ8N137 903 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 PITPNM2Q9BZ72 1349 aa22.81■■□□□ 1.24
LMNA-204ENST00000368298 CYP2E1P05181 493 aaPredicted RBP22.8■■□□□ 1.24
LMNA-204ENST00000368298 ZAP70P43403 619 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 CRKP46108 304 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 MAP1SQ66K74 1059 aaPredicted RBP22.8■■□□□ 1.24
LMNA-204ENST00000368298 ZDHHC15Q96MV8 337 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 SNRKQ9NRH2 765 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 ABCF2Q9UG63 623 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 ECM29Q5VYK3 1845 aa22.8■■□□□ 1.24
LMNA-204ENST00000368298 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
LMNA-204ENST00000368298 TEKT1Q969V4 418 aa22.79■■□□□ 1.24
LMNA-204ENST00000368298 PRMT6Q96LA8 375 aaPredicted RBP22.79■■□□□ 1.24
LMNA-204ENST00000368298 TBC1D9Q6ZT07 1266 aa22.79■■□□□ 1.24
LMNA-204ENST00000368298 DCPSQ96C86 337 aaKnown RBP22.79■■□□□ 1.24
LMNA-204ENST00000368298 FAM163AQ96GL9 167 aaPredicted RBP22.79■■□□□ 1.24
LMNA-204ENST00000368298 ECHDC1Q9NTX5 307 aa22.79■■□□□ 1.24
LMNA-204ENST00000368298 PCDHAC2Q9Y5I4 1007 aa22.79■■□□□ 1.24
LMNA-204ENST00000368298 POLR2AP24928 1970 aaKnown RBP22.78■■□□□ 1.24
LMNA-204ENST00000368298 ASTN2O75129 1339 aaPredicted RBP22.78■■□□□ 1.24
LMNA-204ENST00000368298 CDC37L1Q7L3B6 337 aa22.78■■□□□ 1.24
LMNA-204ENST00000368298 GGA3Q9NZ52 723 aa22.78■■□□□ 1.24
LMNA-204ENST00000368298 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
LMNA-204ENST00000368298 PASKQ96RG2 1323 aa22.77■■□□□ 1.24
LMNA-204ENST00000368298 SALL3Q9BXA9 1300 aa22.77■■□□□ 1.24
LMNA-204ENST00000368298 RBM5P52756 815 aaKnown RBP eCLIP22.77■■□□□ 1.24
LMNA-204ENST00000368298 NUCB1Q02818 461 aa22.77■■□□□ 1.24
LMNA-204ENST00000368298 ANGEL2Q5VTE6 544 aaKnown RBP22.77■■□□□ 1.24
LMNA-204ENST00000368298 BCL11AQ9H165 835 aa22.77■■□□□ 1.24
LMNA-204ENST00000368298 TTC41PQ6P2S7 1318 aa22.77■■□□□ 1.24
LMNA-204ENST00000368298 MYO1BO43795 1136 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 MECOMQ03112 1051 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 APOBEC3HQ6NTF7 200 aaKnown RBP22.76■■□□□ 1.23
LMNA-204ENST00000368298 SLF2Q8IX21 1173 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 ZNF384Q8TF68 577 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
LMNA-204ENST00000368298 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 CCDC136Q96JN2 1154 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 HAUS7Q99871 368 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 LRP2BPQ9P2M1 347 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 GAKO14976 1311 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 DOCK2Q92608 1830 aa22.76■■□□□ 1.23
LMNA-204ENST00000368298 MYH2Q9UKX2 1941 aa22.75■■□□□ 1.23
LMNA-204ENST00000368298 TTF1Q15361 905 aaPredicted RBP22.75■■□□□ 1.23
LMNA-204ENST00000368298 DIXDC1Q155Q3 683 aa22.75■■□□□ 1.23
LMNA-204ENST00000368298 TMED8Q6PL24 325 aaPredicted RBP22.75■■□□□ 1.23
LMNA-204ENST00000368298 CHD1LQ86WJ1 897 aa22.75■■□□□ 1.23
LMNA-204ENST00000368298 DZIP1Q86YF9 867 aaKnown RBP22.75■■□□□ 1.23
LMNA-204ENST00000368298 PIH1D3Q9NQM4 214 aaKnown RBP22.75■■□□□ 1.23
LMNA-204ENST00000368298 DAGLAQ9Y4D2 1042 aa22.75■■□□□ 1.23
LMNA-204ENST00000368298 CEP350Q5VT06 3117 aa22.74■■□□□ 1.23
LMNA-204ENST00000368298 SPDYE2Q495Y8 402 aa22.74■■□□□ 1.23
LMNA-204ENST00000368298 KRT26Q7Z3Y9 468 aa22.74■■□□□ 1.23
LMNA-204ENST00000368298 MYO5AQ9Y4I1 1855 aaKnown RBP22.74■■□□□ 1.23
LMNA-204ENST00000368298 MX1P20591 662 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 GSTO1P78417 241 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 SULF1Q8IWU6 871 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
LMNA-204ENST00000368298 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
LMNA-204ENST00000368298 BOLA2Q9H3K6 86 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 ANTXR1Q9H6X2 564 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 RAI14Q9P0K7 980 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 STAP2Q9UGK3 403 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 NDUFB9Q9Y6M9 179 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 AOX1Q06278 1338 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 LDHCP07864 332 aa22.73■■□□□ 1.23
LMNA-204ENST00000368298 APOBEC3FQ8IUX4 373 aaKnown RBP22.73■■□□□ 1.23
LMNA-204ENST00000368298 TDRD3Q9H7E2 651 aaKnown RBP22.73■■□□□ 1.23
LMNA-204ENST00000368298 ZNF70Q9UC06 446 aaPredicted RBP22.73■■□□□ 1.23
LMNA-204ENST00000368298 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
LMNA-204ENST00000368298 LNPKQ9C0E8 428 aa22.72■■□□□ 1.23
LMNA-204ENST00000368298 PAG1Q9NWQ8 432 aa22.72■■□□□ 1.23
LMNA-204ENST00000368298 GPR75-ASB3A0A0A6YYF3 556 aa22.71■■□□□ 1.23
LMNA-204ENST00000368298 ERC2O15083 957 aa22.71■■□□□ 1.23
LMNA-204ENST00000368298 PI4K2BQ8TCG2 481 aa22.71■■□□□ 1.23
LMNA-204ENST00000368298 DNAJC2Q99543 621 aaKnown RBP22.71■■□□□ 1.23
LMNA-204ENST00000368298 MROH7-TTC4A0A0A0MT08 1334 aa22.71■■□□□ 1.23
LMNA-204ENST00000368298 GOLIM4O00461 696 aa22.7■■□□□ 1.22
LMNA-204ENST00000368298 MAP3K12Q12852 859 aa22.7■■□□□ 1.22
LMNA-204ENST00000368298 FKBP1CQ5VVH2 108 aa22.7■■□□□ 1.22
LMNA-204ENST00000368298 TRPM7Q96QT4 1865 aa22.69■■□□□ 1.22
LMNA-204ENST00000368298 CLRN2A0PK11 232 aa22.69■■□□□ 1.22
LMNA-204ENST00000368298 TRAF5O00463 557 aa22.69■■□□□ 1.22
LMNA-204ENST00000368298 GLRX3O76003 335 aaKnown RBP22.69■■□□□ 1.22
LMNA-204ENST00000368298 APLP1P51693 650 aa22.69■■□□□ 1.22
LMNA-204ENST00000368298 PDE1AP54750 535 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms