RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 WASHC4Q2M389 1173 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 RNF20Q5VTR2 975 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
USF1-203ENST00000368021 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
USF1-203ENST00000368021 TCRBV5S4A2TA0A5A2 114 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
USF1-203ENST00000368021 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 TMED8Q6PL24 325 aaPredicted RBP14.42□□□□□ -0.1
USF1-203ENST00000368021 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 ZNF804AQ7Z570 1209 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 TXNRD3Q86VQ6 643 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 LARGE2Q8N3Y3 721 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
USF1-203ENST00000368021 M0R2C6 588 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 UFL1O94874 794 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 GRIPAP1Q4V328 841 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 CREB3L3Q68CJ9 461 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 TBC1D16Q8TBP0 767 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 JDP2Q8WYK2 163 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 FRAT2O75474 233 aaPredicted RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 HSPD1P10809 573 aaKnown RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 TM6SF1Q9BZW5 370 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 GPBP1L1Q9HC44 474 aaPredicted RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
USF1-203ENST00000368021 IQSEC3Q9UPP2 1182 aaPredicted RBP14.41□□□□□ -0.1
USF1-203ENST00000368021 SLC27A2O14975 620 aa14.4□□□□□ -0.1
USF1-203ENST00000368021 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
USF1-203ENST00000368021 SALL1Q9NSC2 1324 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
USF1-203ENST00000368021 GPAA1O43292 621 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 CD2BP2O95400 341 aaKnown RBP14.39□□□□□ -0.11
USF1-203ENST00000368021 MCM2P49736 904 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 NEK4P51957 841 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 SUPT20HQ8NEM7 779 aa14.39□□□□□ -0.11
USF1-203ENST00000368021 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 ZGPATQ8N5A5 531 aaKnown RBP14.38□□□□□ -0.11
USF1-203ENST00000368021 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 DUOX1Q9NRD9 1551 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
USF1-203ENST00000368021 IL1R1P14778 569 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 PSMA5P28066 241 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 KRT32Q14532 448 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 DOK7Q18PE1 504 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 WDR66Q8TBY9 1149 aa14.38□□□□□ -0.11
USF1-203ENST00000368021 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
USF1-203ENST00000368021 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
USF1-203ENST00000368021 COL4A5P29400 1685 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 GLTPD2A6NH11 291 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 KIAA2012Q0VF49 1180 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 AIDAQ96BJ3 306 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
USF1-203ENST00000368021 DBNDD1Q9H9R9 158 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 ZSWIM6Q9HCJ5 1215 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 CD209Q9NNX6 404 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
USF1-203ENST00000368021 FOXP2O15409 715 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 SPTY2D1Q68D10 685 aaPredicted RBP14.36□□□□□ -0.11
USF1-203ENST00000368021 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
USF1-203ENST00000368021 RAI14Q9P0K7 980 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 MAST2Q6P0Q8 1798 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 FZD9O00144 591 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 CYP21A2P08686 494 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
USF1-203ENST00000368021 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
USF1-203ENST00000368021 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
USF1-203ENST00000368021 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
USF1-203ENST00000368021 G3V3G9 751 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 GNAT2P19087 354 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 NSUN4Q96CB9 384 aaKnown RBP14.35□□□□□ -0.11
USF1-203ENST00000368021 TTC14Q96N46 770 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 EYA3Q99504 573 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 COA1Q9GZY4 146 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 KCNQ5Q9NR82 932 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
USF1-203ENST00000368021 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
USF1-203ENST00000368021 RAD17O75943 681 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 FGAP02671 866 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 CYP7A1P22680 504 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 EIF6P56537 245 aaKnown RBP14.34□□□□□ -0.11
USF1-203ENST00000368021 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
USF1-203ENST00000368021 ALX1Q15699 326 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms