RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SCARF2Q96GP6 870 aaPredicted RBP7.13□□□□□ -1.27
RNU6-560P-201ENST00000364007 IGSF5Q9NSI5 407 aa7.13□□□□□ -1.27
RNU6-560P-201ENST00000364007 DLL1O00548 723 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 CTSBP07858 339 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 CD68P34810 354 aaPredicted RBP7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 ZNF76P36508 570 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 RASIP1Q5U651 963 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 SHISA2Q6UWI4 295 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 ZC3H12CQ9C0D7 883 aaKnown RBP7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 SOX17Q9H6I2 414 aaPredicted RBP7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 COPRSQ9NQ92 184 aa7.12□□□□□ -1.27
RNU6-560P-201ENST00000364007 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 PIK3R2O00459 728 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 TCF3P15923 654 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 NME2P22392 152 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 METTL16Q86W50 562 aaKnown RBP7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 MAP4K3Q8IVH8 894 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 SULF2Q8IWU5 870 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 GRIN3AQ8TCU5 1115 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 RNF34Q969K3 372 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 NRSN2Q9GZP1 204 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 GGT7Q9UJ14 662 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 TLR6Q9Y2C9 796 aa7.11□□□□□ -1.27
RNU6-560P-201ENST00000364007 FAM181BA6NEQ2 426 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 WISP1O95388 367 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 DLGAP3O95886 979 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 MAOBP27338 520 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 ARNTP27540 789 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 POU4F3Q15319 338 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 PRRT3Q5FWE3 981 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 PCNX4Q63HM2 1172 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 UBASH3BQ8TF42 649 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
RNU6-560P-201ENST00000364007 MINDY4BA8MYZ0 360 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 ELNP15502 786 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 SELPP16109 830 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 LIG3P49916 1009 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 TTBK2Q6IQ55 1244 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 HS2ST1Q7LGA3 356 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 ERMP1Q7Z2K6 904 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 PDZD3Q86UT5 571 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 RELL1Q8IUW5 271 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 DDX54Q8TDD1 881 aaKnown RBP7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 RSRP1Q9BUV0 290 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 CBX8Q9HC52 389 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 KBTBD4Q9NVX7 518 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 PCDHB5Q9Y5E4 795 aa7.09□□□□□ -1.27
RNU6-560P-201ENST00000364007 CYP11A1P05108 521 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 AP3B2Q13367 1082 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 DUOXA2Q1HG44 320 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 IGF2-ASQ6U949 168 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 NT5DC4Q86YG4 428 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 STK17AQ9UEE5 414 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
RNU6-560P-201ENST00000364007 LOC100289279A0A1B0GTE1 492 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 GSTP1P09211 210 aaKnown RBP7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 SPATA31C1P0DKV0 1188 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 LIG1P18858 919 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 RACK1P63244 317 aaKnown RBP7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 ZNF252P-AS1Q0IIN9 211 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 MAP1SQ66K74 1059 aaPredicted RBP7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 KCNB2Q92953 911 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 CORO1BQ9BR76 489 aa7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 CCDC86Q9H6F5 360 aaKnown RBP7.07□□□□□ -1.28
RNU6-560P-201ENST00000364007 ALX3O95076 343 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 PF4P02776 101 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 PTPN11Q06124 597 aaPredicted RBP7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 RAD51AP2Q09MP3 1159 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 USP48Q86UV5 1035 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 AGGF1Q8N302 714 aaeCLIP7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 WDR89Q96FK6 387 aaPredicted RBP7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 TMEM74Q96NL1 305 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 CYP8B1Q9UNU6 501 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 SAMM50Q9Y512 469 aa7.06□□□□□ -1.28
RNU6-560P-201ENST00000364007 ZNF862O60290 1169 aa7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 RLBP1P12271 317 aa7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 FAM160A1Q05DH4 1040 aa7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 ACAD11Q709F0 780 aa7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 DDX41Q9UJV9 622 aaKnown RBP7.05□□□□□ -1.28
RNU6-560P-201ENST00000364007 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 ERCC5P28715 1186 aaPredicted RBP7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 CAMK2GQ13555 558 aaPredicted RBP7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 LRRC14Q15048 493 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 LLGL2Q6P1M3 1020 aa7.04□□□□□ -1.28
RNU6-560P-201ENST00000364007 GPBAR1Q8TDU6 330 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms