RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 IQCA1Q86XH1 822 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 INCENPQ9NQS7 918 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 MYSM1Q5VVJ2 828 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 CCDC42Q96M95 316 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 MYCBPQ99417 103 aaPredicted RBP18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 RTN1Q16799 776 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 CFAP58Q5T655 872 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 MAP4K1Q92918 833 aa18.11■□□□□ 0.49
CLSTN1-201ENST00000361311 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 PFKFB1P16118 471 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 IRX5P78411 483 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 ARFGAP2Q8N6H7 521 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 EXOC4Q96A65 974 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 PHLPP2Q6ZVD8 1323 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 CCDC194A0A1B0GVG4 234 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 MAP2K2P36507 400 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 WTAPQ15007 396 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 DPCR1Q3MIW9 517 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 CCDC144BQ3MJ40 725 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 TRMT44Q8IYL2 757 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 NDUFB9Q9Y6M9 179 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 TMCO5BA8MYB1 307 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 IL15P40933 162 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 NDUFA8P51970 172 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 DBNDD2Q9BQY9 259 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 SEPT11Q9NVA2 429 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 GOLGA6BA6NDN3 693 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 NEFHP12036 1026 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 ZRSR2Q15696 482 aaKnown RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 VPS16Q9H269 839 aa18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 CWC25Q9NXE8 425 aaPredicted RBP18.1■□□□□ 0.49
CLSTN1-201ENST00000361311 POLR2DO15514 142 aaKnown RBP18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 CUTAO60888 179 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 PNOCQ13519 176 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 TMTC1Q8IUR5 882 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 MYO1CO00159 1063 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 PSMA7O14818 248 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 TTF1Q15361 905 aaPredicted RBP18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 TSG101Q99816 390 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 FANCLQ9NW38 375 aa18.09■□□□□ 0.49
CLSTN1-201ENST00000361311 IDEP14735 1019 aa18.08■□□□□ 0.49
CLSTN1-201ENST00000361311 CYP26C1Q6V0L0 522 aa18.08■□□□□ 0.49
CLSTN1-201ENST00000361311 NOP2P46087 812 aaKnown RBP18.08■□□□□ 0.49
CLSTN1-201ENST00000361311 SARM1Q6SZW1 724 aa18.08■□□□□ 0.49
CLSTN1-201ENST00000361311 USP27XA6NNY8 438 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 LONRF3Q496Y0 759 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 IFT81Q8WYA0 676 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 CTIFO43310 598 aaKnown RBP18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 TNNI3KQ59H18 835 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 FCHSD1Q86WN1 690 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 FPGT-TNNI3KV9GXZ4 949 aa18.08■□□□□ 0.48
CLSTN1-201ENST00000361311 CCDC151A5D8V7 595 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 PFKFB2O60825 505 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 KRT9P35527 623 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 RCOR1Q9UKL0 485 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 MACROD2A1Z1Q3 448 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 LDHAL6AQ6ZMR3 332 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 FTOQ9C0B1 505 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 STX10O60499 249 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 LIG3P49916 1009 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 VPS36Q86VN1 386 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 SLF1Q9BQI6 1058 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 PARD6BQ9BYG5 372 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 MED4Q9NPJ6 270 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 STAT6P42226 847 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 KBTBD3Q8NAB2 608 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 TCP11L1Q9NUJ3 509 aa18.07■□□□□ 0.48
CLSTN1-201ENST00000361311 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 NLRP1Q9C000 1473 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 G3V3G9 751 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 SEPT7Q16181 437 aaKnown RBP18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 JRKLQ9Y4A0 524 aa18.06■□□□□ 0.48
CLSTN1-201ENST00000361311 A6NNZ2 444 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms