RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TTF2Q9UNY4 1162 aaKnown RBP30.74■■■□□ 2.51
SSBP3-202ENST00000357475 DDNO94850 711 aaPredicted RBP30.73■■■□□ 2.51
SSBP3-202ENST00000357475 PDE6AP16499 860 aa30.73■■■□□ 2.51
SSBP3-202ENST00000357475 SCNN1DP51172 638 aa30.73■■■□□ 2.51
SSBP3-202ENST00000357475 MAP3K12Q12852 859 aa30.73■■■□□ 2.51
SSBP3-202ENST00000357475 SLC9C2Q5TAH2 1124 aa30.73■■■□□ 2.51
SSBP3-202ENST00000357475 SPTY2D1Q68D10 685 aaPredicted RBP30.73■■■□□ 2.51
SSBP3-202ENST00000357475 ADGRA1Q86SQ6 560 aa30.73■■■□□ 2.51
SSBP3-202ENST00000357475 GMPSP49915 693 aaPredicted RBP30.73■■■□□ 2.51
SSBP3-202ENST00000357475 TCRBV5S4A2TA0A5A2 114 aa30.72■■■□□ 2.51
SSBP3-202ENST00000357475 ADD2P35612 726 aa30.72■■■□□ 2.51
SSBP3-202ENST00000357475 DZIP1Q86YF9 867 aaKnown RBP30.72■■■□□ 2.51
SSBP3-202ENST00000357475 GPC2Q8N158 579 aa30.71■■■□□ 2.51
SSBP3-202ENST00000357475 SUGT1Q9Y2Z0 365 aa30.71■■■□□ 2.51
SSBP3-202ENST00000357475 PCDHAC2Q9Y5I4 1007 aa30.71■■■□□ 2.51
SSBP3-202ENST00000357475 ZNF532Q9HCE3 1301 aa30.71■■■□□ 2.51
SSBP3-202ENST00000357475 RNF113AO15541 343 aaKnown RBP30.7■■■□□ 2.51
SSBP3-202ENST00000357475 AGBL3Q8NEM8 1001 aa30.7■■■□□ 2.51
SSBP3-202ENST00000357475 MYO3BQ8WXR4 1341 aa30.7■■■□□ 2.51
SSBP3-202ENST00000357475 FAM227BQ96M60 508 aa30.7■■■□□ 2.51
SSBP3-202ENST00000357475 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.7■■■□□ 2.517e-7■■■□□ 18.1
SSBP3-202ENST00000357475 NAA16Q6N069 864 aaPredicted RBP30.69■■■□□ 2.5
SSBP3-202ENST00000357475 SEC62Q99442 399 aaKnown RBP30.69■■■□□ 2.5
SSBP3-202ENST00000357475 CHMLP26374 656 aa30.68■■■□□ 2.5
SSBP3-202ENST00000357475 RFX7Q2KHR2 1363 aa30.68■■■□□ 2.5
SSBP3-202ENST00000357475 ZC3H4Q9UPT8 1303 aaKnown RBP30.68■■■□□ 2.5
SSBP3-202ENST00000357475 CYP7A1P22680 504 aa30.68■■■□□ 2.5
SSBP3-202ENST00000357475 NMIQ13287 307 aaPredicted RBP30.68■■■□□ 2.5
SSBP3-202ENST00000357475 IL25Q9H293 177 aa30.68■■■□□ 2.5
SSBP3-202ENST00000357475 A0A0D9SFI3 127 aa30.67■■■□□ 2.5
SSBP3-202ENST00000357475 USP17L8P0C7I0 530 aa30.66■■■□□ 2.5
SSBP3-202ENST00000357475 RPS12P25398 132 aaKnown RBP30.65■■■□□ 2.5
SSBP3-202ENST00000357475 UBE3CQ15386 1083 aa30.65■■■□□ 2.5
SSBP3-202ENST00000357475 CWC27Q6UX04 472 aaKnown RBP30.65■■■□□ 2.5
SSBP3-202ENST00000357475 MIGA1Q8NAN2 632 aa30.65■■■□□ 2.5
SSBP3-202ENST00000357475 OSBP2Q969R2 916 aa30.65■■■□□ 2.5
SSBP3-202ENST00000357475 PUS7LQ9H0K6 701 aaKnown RBP30.65■■■□□ 2.5
SSBP3-202ENST00000357475 M0R2C6 588 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 CDC45O75419 566 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 CRKP46108 304 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 ZMYM1Q5SVZ6 1142 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 ZSCAN25Q6NSZ9 544 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 MICALL2Q8IY33 904 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 DPF2Q92785 391 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 DIAPH3Q9NSV4 1193 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 CNOT7Q9UIV1 285 aaKnown RBP30.64■■■□□ 2.5
SSBP3-202ENST00000357475 DAGLAQ9Y4D2 1042 aa30.64■■■□□ 2.5
SSBP3-202ENST00000357475 MROH7-TTC4A0A0A0MT08 1334 aa30.64■■■□□ 2.49
SSBP3-202ENST00000357475 GLTPD2A6NH11 291 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 EGFRP00533 1210 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 ZFYP08048 801 aaPredicted RBP30.63■■■□□ 2.49
SSBP3-202ENST00000357475 GAKO14976 1311 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 MAST3O60307 1309 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 DYNLL1P63167 89 aaKnown RBP30.63■■■□□ 2.49
SSBP3-202ENST00000357475 CCDC129Q6ZRS4 1044 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 APPBP2Q92624 585 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 GPRC5DQ9NZD1 345 aa30.63■■■□□ 2.49
SSBP3-202ENST00000357475 ZNF280AP59817 542 aaPredicted RBP30.62■■■□□ 2.49
SSBP3-202ENST00000357475 DPY19L2Q6NUT2 758 aa30.62■■■□□ 2.49
SSBP3-202ENST00000357475 TEKT1Q969V4 418 aa30.62■■■□□ 2.49
SSBP3-202ENST00000357475 EPS15P42566 896 aa30.61■■■□□ 2.49
SSBP3-202ENST00000357475 GSTO1P78417 241 aa30.61■■■□□ 2.49
SSBP3-202ENST00000357475 CFAP100Q494V2 611 aa30.61■■■□□ 2.49
SSBP3-202ENST00000357475 LRRFIP1Q32MZ4 808 aaKnown RBP30.6■■■□□ 2.49
SSBP3-202ENST00000357475 SAMD7Q7Z3H4 446 aa30.6■■■□□ 2.49
SSBP3-202ENST00000357475 OGFOD1Q8N543 542 aa30.6■■■□□ 2.49
SSBP3-202ENST00000357475 FAM163AQ96GL9 167 aaPredicted RBP30.6■■■□□ 2.49
SSBP3-202ENST00000357475 AATFQ9NY61 560 aaKnown RBP eCLIP30.6■■■□□ 2.49
SSBP3-202ENST00000357475 SERPINA10Q9UK55 444 aa30.6■■■□□ 2.49
SSBP3-202ENST00000357475 HDAC9Q9UKV0 1011 aa30.6■■■□□ 2.49
SSBP3-202ENST00000357475 CDK5RAP2Q96SN8 1893 aa30.6■■■□□ 2.49
SSBP3-202ENST00000357475 HIP1O00291 1037 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 BTDP43251 543 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 RBM5P52756 815 aaKnown RBP eCLIP30.59■■■□□ 2.49
SSBP3-202ENST00000357475 C8orf34Q49A92 452 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 HHIPL2Q6UWX4 724 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 ZNF589Q86UQ0 364 aaPredicted RBP30.59■■■□□ 2.49
SSBP3-202ENST00000357475 ECM29Q5VYK3 1845 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 WDR90Q96KV7 1748 aa30.59■■■□□ 2.49
SSBP3-202ENST00000357475 HDLBPQ00341 1268 aaKnown RBP30.58■■■□□ 2.49
SSBP3-202ENST00000357475 APOBEC3HQ6NTF7 200 aaKnown RBP30.58■■■□□ 2.49
SSBP3-202ENST00000357475 TICAM2Q86XR7 235 aa30.58■■■□□ 2.49
SSBP3-202ENST00000357475 LCORLQ8N3X6 602 aa30.58■■■□□ 2.49
SSBP3-202ENST00000357475 ZDHHC15Q96MV8 337 aa30.58■■■□□ 2.49
SSBP3-202ENST00000357475 RIOK1Q9BRS2 568 aaKnown RBP30.58■■■□□ 2.49
SSBP3-202ENST00000357475 MYOZ2Q9NPC6 264 aa30.58■■■□□ 2.49
SSBP3-202ENST00000357475 GPR75-ASB3A0A0A6YYF3 556 aa30.57■■■□□ 2.49
SSBP3-202ENST00000357475 IGSF3O75054 1194 aa30.57■■■□□ 2.49
SSBP3-202ENST00000357475 MBD4O95243 580 aa30.57■■■□□ 2.49
SSBP3-202ENST00000357475 TBC1D10BQ4KMP7 808 aaPredicted RBP30.57■■■□□ 2.49
SSBP3-202ENST00000357475 RBM26Q5T8P6 1007 aaKnown RBP30.57■■■□□ 2.49
SSBP3-202ENST00000357475 L3MBTL3Q96JM7 780 aaPredicted RBP30.57■■■□□ 2.49
SSBP3-202ENST00000357475 PRMT6Q96LA8 375 aaPredicted RBP30.57■■■□□ 2.49
SSBP3-202ENST00000357475 MRIQ9BWK5 157 aa30.57■■■□□ 2.49
SSBP3-202ENST00000357475 ARMT1Q9H993 441 aa30.57■■■□□ 2.49
SSBP3-202ENST00000357475 LDHCP07864 332 aa30.57■■■□□ 2.48
SSBP3-202ENST00000357475 SLF2Q8IX21 1173 aa30.57■■■□□ 2.48
SSBP3-202ENST00000357475 HELLSQ9NRZ9 838 aa30.57■■■□□ 2.48
SSBP3-202ENST00000357475 MAGEB6P1A0A0J9YX57 407 aa30.56■■■□□ 2.48
SSBP3-202ENST00000357475 POTECB2RU33 542 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms