RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
PTPRA-203ENST00000356147 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
PTPRA-203ENST00000356147 LTN1O94822 1766 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 CDC27P30260 824 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 ADORA1P30542 326 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 PDE4BQ07343 736 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 KCNG4Q8TDN1 519 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 SENP2Q9HC62 589 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 HEG1Q9ULI3 1381 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 FGAP02671 866 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 TFRCP02786 760 aaKnown RBP11.71□□□□□ -0.53
PTPRA-203ENST00000356147 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
PTPRA-203ENST00000356147 CYP2C19P33261 490 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 SCARF1Q14162 830 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 ZNF274Q96GC6 653 aaPredicted RBP11.71□□□□□ -0.53
PTPRA-203ENST00000356147 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
PTPRA-203ENST00000356147 MARF1Q9Y4F3 1742 aaKnown RBP11.71□□□□□ -0.54
PTPRA-203ENST00000356147 A0A0U1RQJ8 604 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 A0A1W2PQ27 194 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 A0A1W2PQ64 194 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 A0A1W2PQD8 194 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 ATP2B1P20020 1258 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.54
PTPRA-203ENST00000356147 ATRIPQ8WXE1 791 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 SMARCE1Q969G3 411 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 PARP3Q9Y6F1 533 aa11.71□□□□□ -0.54
PTPRA-203ENST00000356147 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 FOXP2O15409 715 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 TADA3O75528 432 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 OAS2P29728 719 aaKnown RBP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 ANTXR2P58335 489 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 MTF1Q14872 753 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 TOGARAM2Q6ZUX3 1019 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 ZRANB2O95218 330 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 MICU3Q86XE3 530 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 KCNH5Q8NCM2 988 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
PTPRA-203ENST00000356147 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
PTPRA-203ENST00000356147 RAPGEF4Q8WZA2 1011 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 INTS13Q9NVM9 706 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 RALYLQ86SE5 291 aaKnown RBP11.69□□□□□ -0.54
PTPRA-203ENST00000356147 CPLX3Q8WVH0 158 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 ARGLU1Q9NWB6 273 aaPredicted RBP11.69□□□□□ -0.54
PTPRA-203ENST00000356147 CALCOCO1Q9P1Z2 691 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 PPP2R2CQ9Y2T4 447 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 YEATS4O95619 227 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 FOXO4P98177 505 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 MYL5Q02045 173 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 GRIN1Q05586 938 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 RABL6Q3YEC7 729 aaPredicted RBP11.69□□□□□ -0.54
PTPRA-203ENST00000356147 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 VPS37DQ86XT2 251 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 PCDHA5Q9Y5H7 936 aa11.69□□□□□ -0.54
PTPRA-203ENST00000356147 APPP05067 770 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 BMP6P22004 513 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
PTPRA-203ENST00000356147 PUF60Q9UHX1 559 aaKnown RBP11.68□□□□□ -0.54
PTPRA-203ENST00000356147 COBLO75128 1261 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 CMA1P23946 247 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 IMMTQ16891 758 aaKnown RBP11.68□□□□□ -0.54
PTPRA-203ENST00000356147 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 CNNM3Q8NE01 707 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
PTPRA-203ENST00000356147 DHX58Q96C10 678 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 LZTFL1Q9NQ48 299 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 KCND1Q9NSA2 647 aa11.68□□□□□ -0.54
PTPRA-203ENST00000356147 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 CASQ1P31415 396 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 ZAP70P43403 619 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 CMTR1Q8N1G2 835 aaKnown RBP11.67□□□□□ -0.54
PTPRA-203ENST00000356147 THEMISQ8N1K5 641 aaPredicted RBP11.67□□□□□ -0.54
PTPRA-203ENST00000356147 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms