RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 NSUN4Q96CB9 384 aaKnown RBP28.98■■■□□ 2.23
CHKA-202ENST00000356135 PUS7LQ9H0K6 701 aaKnown RBP28.98■■■□□ 2.23
CHKA-202ENST00000356135 M0R2C6 588 aa28.98■■■□□ 2.23
CHKA-202ENST00000356135 UBE3CQ15386 1083 aa28.98■■■□□ 2.23
CHKA-202ENST00000356135 GPR162Q16538 588 aa28.98■■■□□ 2.23
CHKA-202ENST00000356135 SPTY2D1Q68D10 685 aaPredicted RBP28.98■■■□□ 2.23
CHKA-202ENST00000356135 ADGRA1Q86SQ6 560 aa28.98■■■□□ 2.23
CHKA-202ENST00000356135 ZNF589Q86UQ0 364 aaPredicted RBP28.98■■■□□ 2.23
CHKA-202ENST00000356135 JDP2Q8WYK2 163 aa28.98■■■□□ 2.23
CHKA-202ENST00000356135 RUFY2Q8WXA3 655 aa28.97■■■□□ 2.23
CHKA-202ENST00000356135 APPBP2Q92624 585 aa28.97■■■□□ 2.23
CHKA-202ENST00000356135 F8W031 263 aaPredicted RBP28.96■■■□□ 2.23
CHKA-202ENST00000356135 CYP7A1P22680 504 aa28.96■■■□□ 2.23
CHKA-202ENST00000356135 MCMDC2Q4G0Z9 681 aa28.96■■■□□ 2.23
CHKA-202ENST00000356135 TICAM2Q86XR7 235 aa28.96■■■□□ 2.23
CHKA-202ENST00000356135 NAA16Q6N069 864 aaPredicted RBP28.96■■■□□ 2.23
CHKA-202ENST00000356135 DZIP1Q86YF9 867 aaKnown RBP28.96■■■□□ 2.23
CHKA-202ENST00000356135 HELLSQ9NRZ9 838 aa28.96■■■□□ 2.23
CHKA-202ENST00000356135 MAST3O60307 1309 aa28.95■■■□□ 2.23
CHKA-202ENST00000356135 MYH7P12883 1935 aa28.95■■■□□ 2.22
CHKA-202ENST00000356135 PSMD14O00487 310 aa28.94■■■□□ 2.22
CHKA-202ENST00000356135 DIXDC1Q155Q3 683 aa28.94■■■□□ 2.22
CHKA-202ENST00000356135 CXCL9Q07325 125 aa28.93■■■□□ 2.22
CHKA-202ENST00000356135 MIGA1Q8NAN2 632 aa28.93■■■□□ 2.22
CHKA-202ENST00000356135 UPF2Q9HAU5 1272 aaKnown RBP28.93■■■□□ 2.22
CHKA-202ENST00000356135 LMNB1P20700 586 aa28.93■■■□□ 2.22
CHKA-202ENST00000356135 ANO2Q9NQ90 1003 aa28.93■■■□□ 2.22
CHKA-202ENST00000356135 CCDC88AQ3V6T2 1871 aa28.92■■■□□ 2.22
CHKA-202ENST00000356135 ZBTB12Q9Y330 459 aaPredicted RBP28.92■■■□□ 2.22
CHKA-202ENST00000356135 ZNF646O15015 1829 aaPredicted RBP28.92■■■□□ 2.22
CHKA-202ENST00000356135 KIAA0825Q8IV33 1275 aa28.91■■■□□ 2.22
CHKA-202ENST00000356135 TTF2Q9UNY4 1162 aaKnown RBP28.91■■■□□ 2.22
CHKA-202ENST00000356135 VIL1P09327 827 aaKnown RBP28.9■■■□□ 2.22
CHKA-202ENST00000356135 PTH1RQ03431 593 aa28.9■■■□□ 2.22
CHKA-202ENST00000356135 RAD50Q92878 1312 aa28.9■■■□□ 2.22
CHKA-202ENST00000356135 SCNN1DP51172 638 aa28.9■■■□□ 2.22
CHKA-202ENST00000356135 FKBP1AP62942 108 aaKnown RBP28.9■■■□□ 2.22
CHKA-202ENST00000356135 DYNLL1P63167 89 aaKnown RBP28.89■■■□□ 2.22
CHKA-202ENST00000356135 VPS53Q5VIR6 699 aa28.89■■■□□ 2.22
CHKA-202ENST00000356135 RSBN1LQ6PCB5 846 aaPredicted RBP28.89■■■□□ 2.22
CHKA-202ENST00000356135 LSG1Q9H089 658 aaKnown RBP28.89■■■□□ 2.22
CHKA-202ENST00000356135 ARMT1Q9H993 441 aa28.89■■■□□ 2.22
CHKA-202ENST00000356135 CCDC171Q6TFL3 1326 aa28.89■■■□□ 2.21
CHKA-202ENST00000356135 FZD9O00144 591 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 GPAA1O43292 621 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 CIAPIN1Q6FI81 312 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 SUGT1Q9Y2Z0 365 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 REC8O95072 547 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 MBD4O95243 580 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 TBC1D32Q96NH3 1257 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 USP26Q9BXU7 913 aa28.88■■■□□ 2.21
CHKA-202ENST00000356135 KIAA1211Q6ZU35 1233 aa28.87■■■□□ 2.21
CHKA-202ENST00000356135 LCORLQ8N3X6 602 aa28.87■■■□□ 2.21
CHKA-202ENST00000356135 AIDAQ96BJ3 306 aa28.87■■■□□ 2.21
CHKA-202ENST00000356135 AATFQ9NY61 560 aaKnown RBP eCLIP28.87■■■□□ 2.21
CHKA-202ENST00000356135 MAGEB6P1A0A0J9YX57 407 aa28.86■■■□□ 2.21
CHKA-202ENST00000356135 RNF181Q9P0P0 153 aa28.86■■■□□ 2.21
CHKA-202ENST00000356135 SBF1O95248 1867 aa28.86■■■□□ 2.21
CHKA-202ENST00000356135 EIF5BO60841 1220 aaKnown RBP28.85■■■□□ 2.21
CHKA-202ENST00000356135 GSTO1P78417 241 aa28.85■■■□□ 2.21
CHKA-202ENST00000356135 IPO9Q96P70 1041 aaKnown RBP28.85■■■□□ 2.21
CHKA-202ENST00000356135 STRBPQ96SI9 672 aaKnown RBP28.85■■■□□ 2.21
CHKA-202ENST00000356135 RIOK1Q9BRS2 568 aaKnown RBP28.85■■■□□ 2.21
CHKA-202ENST00000356135 ZNF541Q9H0D2 1346 aa28.85■■■□□ 2.21
CHKA-202ENST00000356135 MAST2Q6P0Q8 1798 aa28.85■■■□□ 2.21
CHKA-202ENST00000356135 EIF6P56537 245 aaKnown RBP28.85■■■□□ 2.21
CHKA-202ENST00000356135 PSME4Q14997 1843 aa28.85■■■□□ 2.21
CHKA-202ENST00000356135 MROH7-TTC4A0A0A0MT08 1334 aa28.84■■■□□ 2.21
CHKA-202ENST00000356135 C9orf131Q5VYM1 1079 aa28.84■■■□□ 2.21
CHKA-202ENST00000356135 GMLQ99445 158 aa28.84■■■□□ 2.21
CHKA-202ENST00000356135 PCDHAC2Q9Y5I4 1007 aa28.84■■■□□ 2.21
CHKA-202ENST00000356135 GJA3Q9Y6H8 435 aa28.84■■■□□ 2.21
CHKA-202ENST00000356135 FOXP2O15409 715 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 PRKAB2O43741 272 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 GRIN3BO60391 1043 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 IGSF3O75054 1194 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 LDHCP07864 332 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 TNIP1Q15025 636 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 HSPD1P10809 573 aaKnown RBP28.83■■■□□ 2.21
CHKA-202ENST00000356135 DAGLAQ9Y4D2 1042 aa28.83■■■□□ 2.21
CHKA-202ENST00000356135 FAM163AQ96GL9 167 aaPredicted RBP28.82■■■□□ 2.2
CHKA-202ENST00000356135 MYH2Q9UKX2 1941 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 BTDP43251 543 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 CRKP46108 304 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 MAP4K1Q92918 833 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 C22orf23Q9BZE7 217 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 MYO3BQ8WXR4 1341 aa28.81■■■□□ 2.2
CHKA-202ENST00000356135 SLF2Q8IX21 1173 aa28.8■■■□□ 2.2
CHKA-202ENST00000356135 DDRGK1Q96HY6 314 aa28.8■■■□□ 2.2
CHKA-202ENST00000356135 GAKO14976 1311 aa28.8■■■□□ 2.2
CHKA-202ENST00000356135 GPR75-ASB3A0A0A6YYF3 556 aa28.8■■■□□ 2.2
CHKA-202ENST00000356135 TMED8Q6PL24 325 aaPredicted RBP28.8■■■□□ 2.2
CHKA-202ENST00000356135 TEKT1Q969V4 418 aa28.8■■■□□ 2.2
CHKA-202ENST00000356135 ADAMTSL1Q8N6G6 1762 aa28.79■■■□□ 2.2
CHKA-202ENST00000356135 SHTN1A0MZ66 631 aa28.79■■■□□ 2.2
CHKA-202ENST00000356135 AGBL3Q8NEM8 1001 aa28.79■■■□□ 2.2
CHKA-202ENST00000356135 SH3RF3Q8TEJ3 882 aaPredicted RBP28.79■■■□□ 2.2
CHKA-202ENST00000356135 SDR42E1Q8WUS8 393 aa28.79■■■□□ 2.2
CHKA-202ENST00000356135 SLC4A4Q9Y6R1 1079 aa28.79■■■□□ 2.2
CHKA-202ENST00000356135 DICER1Q9UPY3 1922 aaKnown RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms