RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 VPS53Q5VIR6 699 aa13.22□□□□□ -0.29
SNU13-202ENST00000355257 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
SNU13-202ENST00000355257 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
SNU13-202ENST00000355257 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
SNU13-202ENST00000355257 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
SNU13-202ENST00000355257 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
SNU13-202ENST00000355257 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
SNU13-202ENST00000355257 ZNF609O15014 1411 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 RIMBP2O15034 1052 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
SNU13-202ENST00000355257 DPF2Q92785 391 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
SNU13-202ENST00000355257 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.29
SNU13-202ENST00000355257 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
SNU13-202ENST00000355257 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
SNU13-202ENST00000355257 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 ECE2O60344 883 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 EGFRP00533 1210 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 FOXO4P98177 505 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 RUFY3Q7L099 469 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
SNU13-202ENST00000355257 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
SNU13-202ENST00000355257 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
SNU13-202ENST00000355257 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
SNU13-202ENST00000355257 AK2P54819 239 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
SNU13-202ENST00000355257 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 EYA3Q99504 573 aa13.19□□□□□ -0.3
SNU13-202ENST00000355257 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
SNU13-202ENST00000355257 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
SNU13-202ENST00000355257 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
SNU13-202ENST00000355257 PRPF40AO75400 957 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 MBD3O95983 291 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 SAPCD2Q86UD0 394 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 SIL1Q9H173 461 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 PDIA4P13667 645 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 CTSWP56202 376 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 TFCP2Q12800 502 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 GPT2Q8TD30 523 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 HAUS7Q99871 368 aa13.18□□□□□ -0.3
SNU13-202ENST00000355257 RBM8AQ9Y5S9 174 aaKnown RBP13.18□□□□□ -0.3
SNU13-202ENST00000355257 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
SNU13-202ENST00000355257 H7C1D1 291 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 UFL1O94874 794 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
SNU13-202ENST00000355257 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
SNU13-202ENST00000355257 PSMA5P28066 241 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 HMG20BQ9P0W2 317 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
SNU13-202ENST00000355257 XDHP47989 1333 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 SLC27A2O14975 620 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 CIAO1O76071 339 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 LBX1P52954 281 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
SNU13-202ENST00000355257 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
SNU13-202ENST00000355257 ZC3H12CQ9C0D7 883 aaKnown RBP13.16□□□□□ -0.3
SNU13-202ENST00000355257 GREM2Q9H772 168 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
SNU13-202ENST00000355257 TAF5LO75529 589 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
SNU13-202ENST00000355257 ECE1P42892 770 aa13.15□□□□□ -0.3
SNU13-202ENST00000355257 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms