RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 BAIAP2L1Q9UHR4 511 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 COMMD10Q9Y6G5 202 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 RNF168Q8IYW5 571 aaPredicted RBP14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 TRMT112Q9UI30 125 aaKnown RBP14.28□□□□□ -0.12
SYNCRIP-201ENST00000355238 E7EVH7 732 aa14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 ZNF853P0CG23 659 aa14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 CCT6AP40227 531 aaKnown RBP14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 NOX5Q96PH1 765 aa14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 CASQ2O14958 399 aaPredicted RBP14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 TSC1Q92574 1164 aa14.27□□□□□ -0.12
SYNCRIP-201ENST00000355238 GADD45BO75293 160 aaPredicted RBP14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 LDHCP07864 332 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 RPS6KB1P23443 525 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 SH2D4BQ5SQS7 431 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 MICAL1Q8TDZ2 1067 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 MCUR1Q96AQ8 359 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 HDAC9Q9UKV0 1011 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 BRD1O95696 1058 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 ARID4AP29374 1257 aaPredicted RBP14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 ERCC6LQ2NKX8 1250 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZNF215Q9UL58 517 aaPredicted RBP14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 TMEM110-MUSTN1A8MSY1 372 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 RAB3IL1Q8TBN0 382 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 MRVI1Q9Y6F6 885 aa14.27□□□□□ -0.13
SYNCRIP-201ENST00000355238 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 TBC1D8BQ0IIM8 1120 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 VAT1LQ9HCJ6 419 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 TPD52P55327 224 aaPredicted RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 C8orf58Q8NAV2 365 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 AOX1Q06278 1338 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 PSMC4P43686 418 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 ANO1Q5XXA6 986 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZNF526Q8TF50 670 aaPredicted RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 RILPL1Q5EBL4 403 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 CTNND2Q9UQB3 1225 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 BAG3O95817 575 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 RASSF2P50749 326 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 RABEP2Q9H5N1 569 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 PAG1Q9NWQ8 432 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
SYNCRIP-201ENST00000355238 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 VAMP4O75379 141 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 GNGT1P63211 74 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CLUL1Q15846 466 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 ARHGEF2Q92974 986 aaKnown RBP14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CSRNP2Q9H175 543 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 PLCB3Q01970 1234 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CFAP157Q5JU67 520 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CCDC51Q96ER9 411 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 USH1CQ9Y6N9 552 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 LUC7L3O95232 432 aaKnown RBP14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 GKAP1Q5VSY0 366 aaPredicted RBP14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CCDC62Q6P9F0 684 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 EFCC1Q9HA90 598 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 GRM8O00222 908 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CFAP221Q4G0U5 840 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 NUP160Q12769 1436 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 CUTAO60888 179 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 EEF2P13639 858 aaKnown RBP14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 IL15P40933 162 aaPredicted RBP14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 BICDL1Q6ZP65 573 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 BICD1Q96G01 975 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 GBP5Q96PP8 586 aa14.25□□□□□ -0.13
SYNCRIP-201ENST00000355238 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 VPS16Q9H269 839 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 RAB3IPQ96QF0 476 aaPredicted RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 SYNCQ9H7C4 482 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 WASLO00401 505 aaPredicted RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 EFCAB13Q8IY85 973 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 ETF1P62495 437 aaKnown RBP14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
SYNCRIP-201ENST00000355238 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 FAM114A2Q9NRY5 505 aa14.23□□□□□ -0.13
SYNCRIP-201ENST00000355238 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms