RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 SLC9C2Q5TAH2 1124 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 CLIC6Q96NY7 704 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
SMTN-202ENST00000347557 ANTXR2P58335 489 aa16.89■□□□□ 0.29
SMTN-202ENST00000347557 IFIT5Q13325 482 aaKnown RBP16.89■□□□□ 0.29
SMTN-202ENST00000347557 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
SMTN-202ENST00000347557 ATL3Q6DD88 541 aa16.89■□□□□ 0.29
SMTN-202ENST00000347557 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.29
SMTN-202ENST00000347557 HPS5Q9UPZ3 1129 aa16.89■□□□□ 0.29
SMTN-202ENST00000347557 C5P01031 1676 aa16.89■□□□□ 0.29
SMTN-202ENST00000347557 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.29
SMTN-202ENST00000347557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMTN-202ENST00000347557 RGPD5Q99666 1765 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 B4E1Z4 1266 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 SYKP43405 635 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 LDHAL6AQ6ZMR3 332 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 SENP2Q9HC62 589 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 CNNM1Q9NRU3 951 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 CHD2O14647 1828 aaKnown RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMTN-202ENST00000347557 GSDMDP57764 484 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
SMTN-202ENST00000347557 ARMCX5Q6P1M9 558 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 NKX2-3Q8TAU0 364 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 OGFRQ9NZT2 677 aa16.88■□□□□ 0.29
SMTN-202ENST00000347557 FOXP2O15409 715 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 NRDCO43847 1150 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 PNOCQ13519 176 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 APPBP2Q92624 585 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 GPR108Q9NPR9 543 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
SMTN-202ENST00000347557 KMT5BQ4FZB7 885 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 NYAP1Q6ZVC0 841 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 MRC1P22897 1456 aa16.87■□□□□ 0.29
SMTN-202ENST00000347557 A0A1W2PQ27 194 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 A0A1W2PQ64 194 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 A0A1W2PQD8 194 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 FANCCQ00597 558 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 E4F1Q66K89 784 aaPredicted RBP16.86■□□□□ 0.29
SMTN-202ENST00000347557 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
SMTN-202ENST00000347557 PDILTQ8N807 584 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 FEZ1Q99689 392 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 SLU7O95391 586 aaKnown RBP16.86■□□□□ 0.29
SMTN-202ENST00000347557 NLRP12P59046 1061 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
SMTN-202ENST00000347557 YEATS4O95619 227 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 KRT40Q6A162 431 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 LRRN4CLQ8ND94 238 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 POLR3EQ9NVU0 708 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 DNAI1Q9UI46 699 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 UBASH3AP57075 661 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 TRIM29Q14134 588 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 BRAPQ7Z569 592 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 PPP1R13BQ96KQ4 1090 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 DPF2Q92785 391 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
SMTN-202ENST00000347557 SLIT3O75094 1523 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
SMTN-202ENST00000347557 MCAMP43121 646 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 TAF3Q5VWG9 929 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.297e-7■■■□□ 17.9
SMTN-202ENST00000347557 SNAP23O00161 211 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
SMTN-202ENST00000347557 CMTR1Q8N1G2 835 aaKnown RBP16.84■□□□□ 0.29
SMTN-202ENST00000347557 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
SMTN-202ENST00000347557 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.29
SMTN-202ENST00000347557 CDC27P30260 824 aa16.83■□□□□ 0.29
SMTN-202ENST00000347557 TCIRG1Q13488 830 aa16.83■□□□□ 0.29
SMTN-202ENST00000347557 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.29
SMTN-202ENST00000347557 KIF6Q6ZMV9 814 aa16.83■□□□□ 0.29
SMTN-202ENST00000347557 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.29
SMTN-202ENST00000347557 ZNF397Q8NF99 534 aaPredicted RBP16.83■□□□□ 0.29
SMTN-202ENST00000347557 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.29
SMTN-202ENST00000347557 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.29
SMTN-202ENST00000347557 CIAO1O76071 339 aa16.83■□□□□ 0.28
SMTN-202ENST00000347557 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
SMTN-202ENST00000347557 ST7Q9NRC1 585 aa16.83■□□□□ 0.28
SMTN-202ENST00000347557 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
SMTN-202ENST00000347557 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms