RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 PRAG1Q86YV5 1406 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 NBPF7P0C2Y1 421 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 ATP5DP30049 168 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 SPATS2LQ9NUQ6 558 aaKnown RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 TXNDC9O14530 226 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 ATP2A1O14983 1001 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 CEP85Q6P2H3 762 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 EPSTI1Q96J88 318 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 MEIS3Q99687 375 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 SNCBQ16143 134 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 DPH6Q7L8W6 267 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 PNMA8AQ86V59 439 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 IFT20Q8IY31 132 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 TMOD2Q9NZR1 351 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 TXNDC16Q9P2K2 825 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 NEDD9Q14511 834 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 CROCCP2Q86T23 111 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 PLIN2Q99541 437 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 TACO1Q9BSH4 297 aaKnown RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 SSX2IPQ9Y2D8 614 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 SETD1BQ9UPS6 1966 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 RTN1Q16799 776 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 PI4KAP2A4QPH2 592 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 UBE3BQ7Z3V4 1068 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 PI4KAP1Q8N8J0 262 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 TCOF1Q13428 1488 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 A0A087WUV0 522 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 ANXA1P04083 346 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 ZNF131P52739 623 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 LDHAL6AQ6ZMR3 332 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 LRRC8AQ8IWT6 810 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 MICAL1Q8TDZ2 1067 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 PSMB7Q99436 277 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 MTRF1LQ9UGC7 380 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 COL17A1Q9UMD9 1497 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 PSDA5PKW4 1024 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 TERF2Q15554 542 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 CFAP157Q5JU67 520 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 PYCARDQ9ULZ3 195 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 STK38LQ9Y2H1 464 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 JRKLQ9Y4A0 524 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 RBBP5Q15291 538 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 GKAP1Q5VSY0 366 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 RUFY4Q6ZNE9 571 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.077e-7■□□□□ 11.1
LMO7-202ENST00000341547 VPS16Q9H269 839 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 BAIAP2L1Q9UHR4 511 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
LMO7-202ENST00000341547 SNAPC4Q5SXM2 1469 aa8.37□□□□□ -1.07
LMO7-202ENST00000341547 NDC80O14777 642 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 SF3B2Q13435 895 aaKnown RBP8.36□□□□□ -1.07
LMO7-202ENST00000341547 PROSER2Q86WR7 435 aaPredicted RBP8.36□□□□□ -1.07
LMO7-202ENST00000341547 EXOC4Q96A65 974 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 CIB2O75838 187 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 ZNF853P0CG23 659 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 MRPS9P82933 396 aaKnown RBP8.36□□□□□ -1.07
LMO7-202ENST00000341547 WAPLQ7Z5K2 1190 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 CERS3Q8IU89 383 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 HSPA1LP34931 641 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 PEX19P40855 299 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 GNGT1P63211 74 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 C8orf74Q6P047 294 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 CABS1Q96KC9 395 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 PTPRKQ15262 1439 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 SSH2Q76I76 1423 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 BICDL2A1A5D9 508 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 PDE4BQ07343 736 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 FCHSD1Q86WN1 690 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
LMO7-202ENST00000341547 CAPS2Q9BXY5 557 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 ICE2Q659A1 982 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 LRRC45Q96CN5 670 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 PRDM11Q9NQV5 511 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 NKIRAS1Q9NYS0 192 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 RXRAP19793 462 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 FAM69CQ0P6D2 419 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 IGSF22Q8N9C0 903 aa8.36□□□□□ -1.07
LMO7-202ENST00000341547 LEO1Q8WVC0 666 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms