RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 VEZTQ9HBM0 779 aa23.55■■□□□ 1.36
SYNE4-202ENST00000340477 CEP350Q5VT06 3117 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 APBB1O00213 710 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 ARID4AP29374 1257 aaPredicted RBP23.54■■□□□ 1.36
SYNE4-202ENST00000340477 TNFAIP1Q13829 316 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 PAXIP1Q6ZW49 1069 aaPredicted RBP23.54■■□□□ 1.36
SYNE4-202ENST00000340477 SIRT2Q8IXJ6 389 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 CLASRPQ8N2M8 674 aaKnown RBP23.54■■□□□ 1.36
SYNE4-202ENST00000340477 C2orf69Q8N8R5 385 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 RHPN1Q8TCX5 695 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 DBNDD2Q9BQY9 259 aa23.54■■□□□ 1.36
SYNE4-202ENST00000340477 MKRN1Q9UHC7 482 aaKnown RBP23.54■■□□□ 1.36
SYNE4-202ENST00000340477 CNTNAP1P78357 1384 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 CLRN2A0PK11 232 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 GRIK5Q16478 980 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 CST9Q5W186 159 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 AACSQ86V21 672 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 DZIP1Q86YF9 867 aaKnown RBP23.53■■□□□ 1.36
SYNE4-202ENST00000340477 SPATA5Q8NB90 893 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 PRMT6Q96LA8 375 aaPredicted RBP23.53■■□□□ 1.36
SYNE4-202ENST00000340477 MRIQ9BWK5 157 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 TMOD2Q9NZR1 351 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 ABCF2Q9UG63 623 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 PPP2R3BQ9Y5P8 575 aa23.53■■□□□ 1.36
SYNE4-202ENST00000340477 DEFB115Q30KQ5 88 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 SLF2Q8IX21 1173 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 DNAJC5GQ8N7S2 189 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 GBA2Q9HCG7 927 aaPredicted RBP23.52■■□□□ 1.36
SYNE4-202ENST00000340477 PCDHAC2Q9Y5I4 1007 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 TLL2Q9Y6L7 1015 aa23.52■■□□□ 1.36
SYNE4-202ENST00000340477 RASSF10A6NK89 507 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 PRDX5P30044 214 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 TNNI2P48788 182 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 HHIPL2Q6UWX4 724 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 CCDC8Q9H0W5 538 aaPredicted RBP23.51■■□□□ 1.35
SYNE4-202ENST00000340477 HMG20BQ9P0W2 317 aa23.51■■□□□ 1.35
SYNE4-202ENST00000340477 PAPPA2Q9BXP8 1791 aa23.5■■□□□ 1.35
SYNE4-202ENST00000340477 SPDYE2Q495Y8 402 aa23.5■■□□□ 1.35
SYNE4-202ENST00000340477 ERICH6Q7L0X2 663 aa23.5■■□□□ 1.35
SYNE4-202ENST00000340477 EAF2Q96CJ1 260 aaPredicted RBP23.5■■□□□ 1.35
SYNE4-202ENST00000340477 IL1RAPL2Q9NP60 686 aa23.5■■□□□ 1.35
SYNE4-202ENST00000340477 DBNLQ9UJU6 430 aaKnown RBP23.5■■□□□ 1.35
SYNE4-202ENST00000340477 SCAF8Q9UPN6 1271 aaKnown RBP23.5■■□□□ 1.35
SYNE4-202ENST00000340477 MYH2Q9UKX2 1941 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 IFIT2P09913 472 aaKnown RBP23.49■■□□□ 1.35
SYNE4-202ENST00000340477 ECE1P42892 770 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 FKBP1BP68106 108 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 AAMPQ13685 434 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 DLK2Q6UY11 383 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 DEFB129Q9H1M3 183 aa23.49■■□□□ 1.35
SYNE4-202ENST00000340477 TDRD3Q9H7E2 651 aaKnown RBP23.49■■□□□ 1.35
SYNE4-202ENST00000340477 ZNF70Q9UC06 446 aaPredicted RBP23.49■■□□□ 1.35
SYNE4-202ENST00000340477 MCAMP43121 646 aa23.48■■□□□ 1.35
SYNE4-202ENST00000340477 HUNKP57058 714 aa23.48■■□□□ 1.35
SYNE4-202ENST00000340477 TTLL12Q14166 644 aaPredicted RBP23.48■■□□□ 1.35
SYNE4-202ENST00000340477 SAPCD2Q86UD0 394 aa23.48■■□□□ 1.35
SYNE4-202ENST00000340477 ZNF512BQ96KM6 892 aaPredicted RBP23.48■■□□□ 1.35
SYNE4-202ENST00000340477 LRRCC1Q9C099 1032 aa23.48■■□□□ 1.35
SYNE4-202ENST00000340477 MAST2Q6P0Q8 1798 aa23.47■■□□□ 1.35
SYNE4-202ENST00000340477 GSTO1P78417 241 aa23.47■■□□□ 1.35
SYNE4-202ENST00000340477 HHIPL1Q96JK4 782 aa23.47■■□□□ 1.35
SYNE4-202ENST00000340477 TLR7Q9NYK1 1049 aaKnown RBP23.47■■□□□ 1.35
SYNE4-202ENST00000340477 DIXDC1Q155Q3 683 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 PI16Q6UXB8 463 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 RAI14Q9P0K7 980 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 LRP2BPQ9P2M1 347 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 DAGLAQ9Y4D2 1042 aa23.46■■□□□ 1.35
SYNE4-202ENST00000340477 GRM1Q13255 1194 aa23.45■■□□□ 1.34
SYNE4-202ENST00000340477 SUPT20HL1Q3ZLR7 823 aa23.45■■□□□ 1.34
SYNE4-202ENST00000340477 PRAMEF18Q5VWM3 479 aa23.45■■□□□ 1.34
SYNE4-202ENST00000340477 SNRKQ9NRH2 765 aa23.45■■□□□ 1.34
SYNE4-202ENST00000340477 AOX1Q06278 1338 aa23.44■■□□□ 1.34
SYNE4-202ENST00000340477 TCP10L2B9ZVM9 353 aa23.44■■□□□ 1.34
SYNE4-202ENST00000340477 LDHCP07864 332 aa23.44■■□□□ 1.34
SYNE4-202ENST00000340477 VEGFBP49765 207 aa23.44■■□□□ 1.34
SYNE4-202ENST00000340477 RASA3Q14644 834 aa23.44■■□□□ 1.34
SYNE4-202ENST00000340477 APOBEC3HQ6NTF7 200 aaKnown RBP23.44■■□□□ 1.34
SYNE4-202ENST00000340477 SUPT16HQ9Y5B9 1047 aaKnown RBP23.44■■□□□ 1.34
SYNE4-202ENST00000340477 WDR33Q9C0J8 1336 aaKnown RBP23.43■■□□□ 1.34
SYNE4-202ENST00000340477 ARMC9Q7Z3E5 817 aa23.43■■□□□ 1.34
SYNE4-202ENST00000340477 JMYQ8N9B5 988 aa23.43■■□□□ 1.34
SYNE4-202ENST00000340477 CAPNS2Q96L46 248 aa23.43■■□□□ 1.34
SYNE4-202ENST00000340477 NOL10Q9BSC4 688 aaKnown RBP23.43■■□□□ 1.34
SYNE4-202ENST00000340477 DCTPP1Q9H773 170 aa23.43■■□□□ 1.34
SYNE4-202ENST00000340477 PCDHB15Q9Y5E8 787 aa23.43■■□□□ 1.34
SYNE4-202ENST00000340477 MROH7-TTC4A0A0A0MT08 1334 aa23.42■■□□□ 1.34
SYNE4-202ENST00000340477 IGSF3O75054 1194 aa23.42■■□□□ 1.34
SYNE4-202ENST00000340477 MECOMQ03112 1051 aa23.42■■□□□ 1.34
SYNE4-202ENST00000340477 FKBP1CQ5VVH2 108 aa23.42■■□□□ 1.34
SYNE4-202ENST00000340477 TBC1D9Q6ZT07 1266 aa23.42■■□□□ 1.34
SYNE4-202ENST00000340477 ZBTB47Q9UFB7 747 aaPredicted RBP23.42■■□□□ 1.34
SYNE4-202ENST00000340477 GAKO14976 1311 aa23.41■■□□□ 1.34
SYNE4-202ENST00000340477 PPP1R12BO60237 982 aaPredicted RBP23.41■■□□□ 1.34
SYNE4-202ENST00000340477 CYP4F22Q6NT55 531 aa23.41■■□□□ 1.34
SYNE4-202ENST00000340477 RGMBQ6NW40 437 aa23.41■■□□□ 1.34
SYNE4-202ENST00000340477 HOOK2Q96ED9 719 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms