RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ZKSCAN3Q9BRR0 538 aa18.66■□□□□ 0.58
SCARB1-202ENST00000339570 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
SCARB1-202ENST00000339570 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
SCARB1-202ENST00000339570 ZNF213O14771 459 aa18.66■□□□□ 0.58
SCARB1-202ENST00000339570 LTN1O94822 1766 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 ERBB3P21860 1342 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 FOXO4P98177 505 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
SCARB1-202ENST00000339570 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 FBXO18Q8NFZ0 1043 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 CWC25Q9NXE8 425 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-202ENST00000339570 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 CCDC158Q5M9N0 1113 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 HELBQ8NG08 1087 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-202ENST00000339570 HELLSQ9NRZ9 838 aa18.65■□□□□ 0.58
SCARB1-202ENST00000339570 B4E1Z4 1266 aa18.64■□□□□ 0.58
SCARB1-202ENST00000339570 KLHL10Q6JEL2 608 aa18.64■□□□□ 0.58
SCARB1-202ENST00000339570 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.58
SCARB1-202ENST00000339570 DSCC1Q9BVC3 393 aa18.64■□□□□ 0.58
SCARB1-202ENST00000339570 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
SCARB1-202ENST00000339570 KCNG4Q8TDN1 519 aa18.64■□□□□ 0.57
SCARB1-202ENST00000339570 XAGE2Q96GT9 111 aa18.64■□□□□ 0.57
SCARB1-202ENST00000339570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■■□□ 17.3
SCARB1-202ENST00000339570 SNAP23O00161 211 aa18.64■□□□□ 0.57
SCARB1-202ENST00000339570 TRDNQ13061 729 aa18.64■□□□□ 0.57
SCARB1-202ENST00000339570 EYA2O00167 538 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 NLRP12P59046 1061 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 GNG11P61952 73 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 VPS37DQ86XT2 251 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 SH3TC1Q8TE82 1336 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
SCARB1-202ENST00000339570 ZNF274Q96GC6 653 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-202ENST00000339570 GPAA1O43292 621 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 IRX2Q9BZI1 471 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-202ENST00000339570 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCARB1-202ENST00000339570 ANTXR2P58335 489 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-202ENST00000339570 HPS5Q9UPZ3 1129 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 KIF23Q02241 960 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-202ENST00000339570 CCDC150Q8NCX0 1101 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 PLBD2Q8NHP8 589 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 KCNJ14Q9UNX9 436 aa18.62■□□□□ 0.57
SCARB1-202ENST00000339570 hCG_1642624A0A1W2PR95 340 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
SCARB1-202ENST00000339570 STX17P56962 302 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 NCAPHQ15003 741 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 LONRF3Q496Y0 759 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 NCOA7Q8NI08 942 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 SLC9C2Q5TAH2 1124 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 KRT40Q6A162 431 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 TMCO3Q6UWJ1 677 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 OLFM4Q6UX06 510 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 CDC27P30260 824 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 GRIN1Q05586 938 aa18.61■□□□□ 0.57
SCARB1-202ENST00000339570 GABPB1Q06547 395 aaPredicted RBP18.61■□□□□ 0.57
SCARB1-202ENST00000339570 RABL6Q3YEC7 729 aaPredicted RBP18.61■□□□□ 0.57
SCARB1-202ENST00000339570 CASP1P29466 404 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 PDE4BQ07343 736 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 SALL1Q9NSC2 1324 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 ANKARQ7Z5J8 1434 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 ADGRL3Q9HAR2 1447 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 DHX16O60231 1041 aaKnown RBP18.6■□□□□ 0.57
SCARB1-202ENST00000339570 EVCP57679 992 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 SYCP1Q15431 976 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 SHC4Q6S5L8 630 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 PCDHA5Q9Y5H7 936 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
SCARB1-202ENST00000339570 FANCGO15287 622 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 ETF1P62495 437 aaKnown RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 SKIDA1Q1XH10 827 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 CYB5R4Q7L1T6 521 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 OSBPL5Q9H0X9 879 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 METTL24Q5JXM2 366 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 AXDND1Q5T1B0 1012 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 BBXQ8WY36 941 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 FOXP2O15409 715 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 PNMA6AP0CW24 399 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 CTDSPL2Q05D32 466 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 TRIM29Q14134 588 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
SCARB1-202ENST00000339570 MTF1Q14872 753 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 STAMQ92783 540 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 WDR24Q96S15 920 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 JCADQ9P266 1359 aa18.59■□□□□ 0.57
SCARB1-202ENST00000339570 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
SCARB1-202ENST00000339570 TFRCP02786 760 aaKnown RBP18.58■□□□□ 0.57
SCARB1-202ENST00000339570 MYL5Q02045 173 aa18.58■□□□□ 0.56
SCARB1-202ENST00000339570 LRP10Q7Z4F1 713 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms