RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 LLPHQ9BRT6 129 aaKnown RBP6.19□□□□□ -1.42
PTPRB-202ENST00000334414 GUCA1BQ9UMX6 200 aa6.19□□□□□ -1.42
PTPRB-202ENST00000334414 SPTLC2O15270 562 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 PFDN1O60925 122 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC122Q5T0U0 273 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 TYW1Q9NV66 732 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 PRR16Q569H4 304 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 UTP14AQ9BVJ6 771 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 ADGRL1O94910 1474 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 LMNB1P20700 586 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 SH3GL3Q99963 347 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 NAIPQ13075 1403 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 ATP2C2O75185 946 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 RFC1P35251 1148 aaPredicted RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 SPTY2D1Q68D10 685 aaPredicted RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CNPY2Q9Y2B0 182 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 SYNRGQ9UMZ2 1314 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 MAN1A1P33908 653 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 ARHGAP18Q8N392 663 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 RUBCNQ92622 972 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CPLX3Q8WVH0 158 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CLSTN2Q9H4D0 955 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 EIF3CLB5ME19 914 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 IFIT1P09914 478 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 EPSTI1Q96J88 318 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 EIF3CQ99613 913 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 SYNCQ9H7C4 482 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 FAF1Q9UNN5 650 aaPredicted RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC92Q53HC0 331 aaPredicted RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 TCERG1LQ5VWI1 586 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 PPP1R9AQ9ULJ8 1098 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 ZNF569Q5MCW4 686 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 ARHGEF2Q92974 986 aaKnown RBP6.18□□□□□ -1.42
PTPRB-202ENST00000334414 REREQ9P2R6 1566 aa6.18□□□□□ -1.42
PTPRB-202ENST00000334414 TRIM27P14373 513 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 ZGPATQ8N5A5 531 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 SPZ1Q9BXG8 430 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 CREB3O43889 395 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 ERCC5P28715 1186 aaPredicted RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 GLT8D2Q9H1C3 349 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 TXLNGQ9NUQ3 528 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 IGF1RP08069 1367 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 RUSC2Q8N2Y8 1516 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 SMIM24O75264 130 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 LIN9Q5TKA1 542 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 NME8Q8N427 588 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 IFT81Q8WYA0 676 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 NRBF2Q96F24 287 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 STX10O60499 249 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 KRT3P12035 628 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 CABP4P57796 275 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 COG7P83436 770 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 TSC1Q92574 1164 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 E7EVH7 732 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PLCD1P51178 756 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PPP2R5BQ15173 497 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 RUFY3Q7L099 469 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 BBOF1Q8ND07 529 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 KIF24Q5T7B8 1368 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 RHOXF2BP0C7M4 288 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 TMPOP42166 694 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 SYT10Q6XYQ8 523 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 RHOXF2Q9BQY4 288 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 UBA5Q9GZZ9 404 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 SLC52A1Q9NWF4 448 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 TMOD2Q9NZR1 351 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 DAAM1Q9Y4D1 1078 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 CERS3Q8IU89 383 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 HSPA8P11142 646 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 KIF11P52732 1056 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 EXOC4Q96A65 974 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 RRP36Q96EU6 259 aaKnown RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 VSIG1Q86XK7 387 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 LEO1Q8WVC0 666 aaPredicted RBP6.17□□□□□ -1.42
PTPRB-202ENST00000334414 STAG1Q8WVM7 1258 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PPP1R9BQ96SB3 815 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PARD3Q8TEW0 1356 aa6.17□□□□□ -1.42
PTPRB-202ENST00000334414 PTGS1P23219 599 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC144CPQ8IYA2 1237 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 KCNH5Q8NCM2 988 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 SDCCAG3Q96C92 435 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 KAT14Q9H8E8 782 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 MPNDQ8N594 471 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 RIOK3O14730 519 aaKnown RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 KRT2P35908 639 aa6.16□□□□□ -1.42
PTPRB-202ENST00000334414 ZFP91Q96JP5 570 aaPredicted RBP6.16□□□□□ -1.42
PTPRB-202ENST00000334414 GGNBP2Q9H3C7 697 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms