RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF594Q96JF6 807 aaPredicted RBP27.3■■□□□ 1.96
TSKU-201ENST00000333090 HPS5Q9UPZ3 1129 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 A0A1B0GUL7 405 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 CCP110O43303 1012 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 IL15P40933 162 aaPredicted RBP27.3■■□□□ 1.96
TSKU-201ENST00000333090 IMMTQ16891 758 aaKnown RBP27.3■■□□□ 1.96
TSKU-201ENST00000333090 CFAP100Q494V2 611 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 FBXL16Q8N461 479 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 MNS1Q8NEH6 495 aa27.3■■□□□ 1.96
TSKU-201ENST00000333090 URI1O94763 535 aaPredicted RBP27.29■■□□□ 1.96
TSKU-201ENST00000333090 KIF23Q02241 960 aaPredicted RBP27.29■■□□□ 1.96
TSKU-201ENST00000333090 PTPN21Q16825 1174 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 PLBD2Q8NHP8 589 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 UTP14AQ9BVJ6 771 aaKnown RBP27.29■■□□□ 1.96
TSKU-201ENST00000333090 PHLPP2Q6ZVD8 1323 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 SYKP43405 635 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 GOLGA8FQ08AF8 430 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 GOLGA8DPQ0D2H9 430 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 C19orf44Q9H6X5 657 aa27.29■■□□□ 1.96
TSKU-201ENST00000333090 GPR108Q9NPR9 543 aa27.28■■□□□ 1.96
TSKU-201ENST00000333090 SLIT3O75094 1523 aa27.28■■□□□ 1.96
TSKU-201ENST00000333090 ARGLU1Q9NWB6 273 aaPredicted RBP27.28■■□□□ 1.96
TSKU-201ENST00000333090 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
TSKU-201ENST00000333090 TRIM65Q6PJ69 517 aa27.27■■□□□ 1.96
TSKU-201ENST00000333090 TMCO3Q6UWJ1 677 aa27.27■■□□□ 1.96
TSKU-201ENST00000333090 FANCGO15287 622 aa27.26■■□□□ 1.96
TSKU-201ENST00000333090 FGAP02671 866 aa27.26■■□□□ 1.96
TSKU-201ENST00000333090 TATP17735 454 aaPredicted RBP27.26■■□□□ 1.96
TSKU-201ENST00000333090 MYL5Q02045 173 aa27.26■■□□□ 1.96
TSKU-201ENST00000333090 HSP90AB3PQ58FF7 597 aa27.26■■□□□ 1.96
TSKU-201ENST00000333090 PLA2G4AP47712 749 aa27.26■■□□□ 1.95
TSKU-201ENST00000333090 FAM177A1Q8N128 213 aaPredicted RBP27.26■■□□□ 1.95
TSKU-201ENST00000333090 H7C1W4 665 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 EYA2O00167 538 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 FOXP2O15409 715 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 CYP27B1O15528 508 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 SLC39A14Q15043 492 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 RALYLQ86SE5 291 aaKnown RBP27.25■■□□□ 1.95
TSKU-201ENST00000333090 MB21D2Q8IYB1 491 aaPredicted RBP27.25■■□□□ 1.95
TSKU-201ENST00000333090 CARD6Q9BX69 1037 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 MEGF6O75095 1541 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 ZBTB22O15209 634 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 CBFA2T2O43439 604 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 ATF3P18847 181 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 PNOCQ13519 176 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 AIFM3Q96NN9 605 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 ANTXR2P58335 489 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 TICAM2Q86XR7 235 aa27.25■■□□□ 1.95
TSKU-201ENST00000333090 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 TIGD1Q96MW7 591 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 TUBE1Q9UJT0 475 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 TMEM232C9JQI7 657 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 TOP1P11387 765 aaKnown RBP27.24■■□□□ 1.95
TSKU-201ENST00000333090 FAM193AP78312 1265 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 NCOA7Q8NI08 942 aa27.24■■□□□ 1.95
TSKU-201ENST00000333090 PUS3Q9BZE2 481 aaKnown RBP27.24■■□□□ 1.95
TSKU-201ENST00000333090 ZRANB2O95218 330 aaKnown RBP eCLIP27.23■■□□□ 1.95
TSKU-201ENST00000333090 REXO1L1PQ8IX06 675 aa27.23■■□□□ 1.95
TSKU-201ENST00000333090 ZNF142P52746 1687 aaPredicted RBP27.23■■□□□ 1.95
TSKU-201ENST00000333090 LMTK3Q96Q04 1460 aa27.23■■□□□ 1.95
TSKU-201ENST00000333090 TADA3O75528 432 aa27.23■■□□□ 1.95
TSKU-201ENST00000333090 SRRTQ9BXP5 876 aaKnown RBP27.23■■□□□ 1.95
TSKU-201ENST00000333090 TMX1Q9H3N1 280 aa27.23■■□□□ 1.95
TSKU-201ENST00000333090 CWC25Q9NXE8 425 aaPredicted RBP27.23■■□□□ 1.95
TSKU-201ENST00000333090 CREBRFQ8IUR6 639 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 VSTM4Q8IW00 320 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 ARFGEF2Q9Y6D5 1785 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 CAMTA1Q9Y6Y1 1673 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 SEC31AO94979 1220 aaKnown RBP27.22■■□□□ 1.95
TSKU-201ENST00000333090 CYP2C19P33261 490 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 SHC4Q6S5L8 630 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 PARP3Q9Y6F1 533 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
TSKU-201ENST00000333090 GNL2Q13823 731 aaKnown RBP27.21■■□□□ 1.95
TSKU-201ENST00000333090 VPS37DQ86XT2 251 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 FANCLQ9NW38 375 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 CALCOCO1Q9P1Z2 691 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 SCN11AQ9UI33 1791 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 LRRFIP1Q32MZ4 808 aaKnown RBP27.21■■□□□ 1.95
TSKU-201ENST00000333090 HSP90AA4PQ58FG1 418 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 ALG1Q9BT22 464 aa27.21■■□□□ 1.95
TSKU-201ENST00000333090 POLR3GO15318 223 aaPredicted RBP27.2■■□□□ 1.95
TSKU-201ENST00000333090 TTC39AQ5SRH9 613 aa27.2■■□□□ 1.95
TSKU-201ENST00000333090 OLFM4Q6UX06 510 aa27.2■■□□□ 1.95
TSKU-201ENST00000333090 EPC1Q9H2F5 836 aa27.2■■□□□ 1.95
TSKU-201ENST00000333090 TRPM3Q9HCF6 1732 aaPredicted RBP27.2■■□□□ 1.94
TSKU-201ENST00000333090 EFCAB8A8MWE9 144 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 ZSCAN12O43309 604 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 TTLL7Q6ZT98 887 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 CLIC6Q96NY7 704 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 CEP126Q9P2H0 1117 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 HPSEQ9Y251 543 aa27.2■■□□□ 1.94
TSKU-201ENST00000333090 ZNF213O14771 459 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 RXRAP19793 462 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 CCDC158Q5M9N0 1113 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 JMYQ8N9B5 988 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 PUS7LQ9H0K6 701 aaKnown RBP27.19■■□□□ 1.94
TSKU-201ENST00000333090 ADORA1P30542 326 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 DCAF5Q96JK2 942 aa27.19■■□□□ 1.94
TSKU-201ENST00000333090 PPP2R2CQ9Y2T4 447 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms