RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZMAT2Q96NC0 199 aaKnown RBP18.38■□□□□ 0.53
PTCH1-201ENST00000331920 TPX2Q9ULW0 747 aaKnown RBP18.37■□□□□ 0.53
PTCH1-201ENST00000331920 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 TSTA3Q13630 321 aaPredicted RBP18.37■□□□□ 0.53
PTCH1-201ENST00000331920 HDXQ7Z353 690 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 RNF10Q8N5U6 811 aaKnown RBP18.37■□□□□ 0.53
PTCH1-201ENST00000331920 CYP7A1P22680 504 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 SYT10Q6XYQ8 523 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 MAEAQ7L5Y9 396 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 SPDL1Q96EA4 605 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 CSRNP2Q9H175 543 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 RASSF4Q9H2L5 321 aa18.37■□□□□ 0.53
PTCH1-201ENST00000331920 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
PTCH1-201ENST00000331920 TRPC3Q13507 836 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 PLCB4Q15147 1175 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 AFAP1L1Q8TED9 768 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 CASP2P42575 452 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 TNNI2P48788 182 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 SKA2Q8WVK7 121 aaPredicted RBP18.36■□□□□ 0.53
PTCH1-201ENST00000331920 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 DCLK2Q8N568 766 aa18.36■□□□□ 0.53
PTCH1-201ENST00000331920 CCDC169A6NNP5 214 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 NSMCE1Q8WV22 266 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 NFE2L2Q16236 605 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 VSIG1Q86XK7 387 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 CHMP2AO43633 222 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 HHATQ5VTY9 493 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 HDAC9Q9UKV0 1011 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 RNF168Q8IYW5 571 aaPredicted RBP18.35■□□□□ 0.53
PTCH1-201ENST00000331920 VPS41P49754 854 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 GABPB2Q8TAK5 448 aaPredicted RBP18.35■□□□□ 0.53
PTCH1-201ENST00000331920 CTNND2Q9UQB3 1225 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
PTCH1-201ENST00000331920 KCNG4Q8TDN1 519 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 GBP5Q96PP8 586 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 KRT23Q9C075 422 aa18.35■□□□□ 0.53
PTCH1-201ENST00000331920 PTPRGP23470 1445 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.34■□□□□ 0.53
PTCH1-201ENST00000331920 RRP36Q96EU6 259 aaKnown RBP18.34■□□□□ 0.53
PTCH1-201ENST00000331920 BAG2O95816 211 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
PTCH1-201ENST00000331920 PHEXP78562 749 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 FOXD4Q12950 439 aaPredicted RBP18.34■□□□□ 0.53
PTCH1-201ENST00000331920 NGLY1Q96IV0 654 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 MUM1Q2TAK8 710 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 GPIHBP1Q8IV16 184 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 MAFGO15525 162 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 KRT2P35908 639 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 SESN3P58005 492 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
PTCH1-201ENST00000331920 SLC12A2P55011 1212 aa18.34■□□□□ 0.53
PTCH1-201ENST00000331920 NDUFAB1O14561 156 aa18.33■□□□□ 0.53
PTCH1-201ENST00000331920 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.53
PTCH1-201ENST00000331920 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.53
PTCH1-201ENST00000331920 NBPF4Q96M43 638 aa18.33■□□□□ 0.53
PTCH1-201ENST00000331920 ABL1P00519 1130 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 CCDC38Q502W7 563 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 USP48Q86UV5 1035 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 PLEKHA4Q9H4M7 779 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 VCX3AQ9NNX9 186 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 CNGA1P29973 690 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 Q6ZUG5 572 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 ARFGAP2Q8N6H7 521 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 POMGNT1Q8WZA1 660 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 SPATA17Q96L03 361 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 ZBTB24O43167 697 aaPredicted RBP18.33■□□□□ 0.52
PTCH1-201ENST00000331920 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
PTCH1-201ENST00000331920 B4DLN1 442 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
PTCH1-201ENST00000331920 KRT79Q5XKE5 535 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 HP1BP3Q5SSJ5 553 aaPredicted RBP18.32■□□□□ 0.52
PTCH1-201ENST00000331920 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 KRT3P12035 628 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 JAG2Q9Y219 1238 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
PTCH1-201ENST00000331920 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
PTCH1-201ENST00000331920 PPP2R5AQ15172 486 aa18.32■□□□□ 0.52
PTCH1-201ENST00000331920 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
PTCH1-201ENST00000331920 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
PTCH1-201ENST00000331920 INPP5BP32019 993 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 PPP2R3AQ06190 1150 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 TBC1D9Q6ZT07 1266 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 ESR2Q92731 530 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 IRAK4Q9NWZ3 460 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 ASIC3Q9UHC3 531 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 UIMC1Q96RL1 719 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 SAT1P21673 171 aa18.31■□□□□ 0.52
PTCH1-201ENST00000331920 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms