RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 EYA2O00167 538 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
TFE3-201ENST00000315869 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
TFE3-201ENST00000315869 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.35
TFE3-201ENST00000315869 OGFRQ9NZT2 677 aa17.27■□□□□ 0.35
TFE3-201ENST00000315869 CTNNA3Q9UI47 895 aa17.27■□□□□ 0.35
TFE3-201ENST00000315869 IDH1O75874 414 aaKnown RBP17.26■□□□□ 0.35
TFE3-201ENST00000315869 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 MICU3Q86XE3 530 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 ZNF213O14771 459 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 ZNF202O95125 648 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
TFE3-201ENST00000315869 PDILTQ8N807 584 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
TFE3-201ENST00000315869 FEZ1Q99689 392 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 GTPBP4Q9BZE4 634 aaKnown RBP17.25■□□□□ 0.35
TFE3-201ENST00000315869 FGAP02671 866 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 GSDMDP57764 484 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 EXOSC10Q01780 885 aaKnown RBP17.25■□□□□ 0.35
TFE3-201ENST00000315869 ADALQ6DHV7 355 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 ATG9AQ7Z3C6 839 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 EP400Q96L91 3159 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 SH3TC1Q8TE82 1336 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 STARD3NLO95772 234 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
TFE3-201ENST00000315869 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
TFE3-201ENST00000315869 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
TFE3-201ENST00000315869 CDC25BP30305 580 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 FOXO4P98177 505 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 GOLGA8FQ08AF8 430 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 GOLGA8DPQ0D2H9 430 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 SARM1Q6SZW1 724 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 MARCH10Q8NA82 808 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 LINC00301Q8NCQ3 95 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 ERICH4A6NGS2 130 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 SLU7O95391 586 aaKnown RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 ZAP70P43403 619 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 ZNF274Q96GC6 653 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 CCZ1BP86790 482 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 CCZ1P86791 482 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
TFE3-201ENST00000315869 PHKBQ93100 1093 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 DNAI1Q9UI46 699 aa17.24■□□□□ 0.35
TFE3-201ENST00000315869 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 SPECC1Q5M775 1068 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 SYKP43405 635 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 CASP7P55210 303 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
TFE3-201ENST00000315869 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
TFE3-201ENST00000315869 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
TFE3-201ENST00000315869 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 SNAP23O00161 211 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 TRIM29Q14134 588 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 MNS1Q8NEH6 495 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 ZBTB9Q96C00 473 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 RTEL1Q9NZ71 1219 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 URI1O94763 535 aaPredicted RBP17.22■□□□□ 0.35
TFE3-201ENST00000315869 PFKFB1P16118 471 aa17.22■□□□□ 0.35
TFE3-201ENST00000315869 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
TFE3-201ENST00000315869 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
TFE3-201ENST00000315869 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
TFE3-201ENST00000315869 H7C1W4 665 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 UBASH3AP57075 661 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 SCARF1Q14162 830 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 HELBQ8NG08 1087 aaPredicted RBP17.21■□□□□ 0.35
TFE3-201ENST00000315869 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
TFE3-201ENST00000315869 GPAA1O43292 621 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 TOM1O60784 492 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 FANCCQ00597 558 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 TCIRG1Q13488 830 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.34
TFE3-201ENST00000315869 FBXO38Q6PIJ6 1188 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 CLIC6Q96NY7 704 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.34
TFE3-201ENST00000315869 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
TFE3-201ENST00000315869 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.343e-8■■■□□ 18.8
TFE3-201ENST00000315869 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
TFE3-201ENST00000315869 KRT222Q8N1A0 295 aa17.2■□□□□ 0.34
TFE3-201ENST00000315869 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
TFE3-201ENST00000315869 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
TFE3-201ENST00000315869 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms