RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 EPS15P42566 896 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 ZAP70P43403 619 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 MAP3K12Q12852 859 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 LRRFIP1Q32MZ4 808 aaKnown RBP21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 HHIPL2Q6UWX4 724 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 TICAM2Q86XR7 235 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 TEKT1Q969V4 418 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 LDHCP07864 332 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 KIF4BQ2VIQ3 1234 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 PI16Q6UXB8 463 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 BOLA2Q9H3K6 86 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 SNRKQ9NRH2 765 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 PAG1Q9NWQ8 432 aa21.75■■□□□ 1.07
SSSCA1-201ENST00000309328 MYO1BO43795 1136 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 PRDX5P30044 214 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 DLGAP5Q15398 846 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 LDHDQ86WU2 507 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 CERS3Q8IU89 383 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 FAM163AQ96GL9 167 aaPredicted RBP21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 DNAJC2Q99543 621 aaKnown RBP21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 RAI14Q9P0K7 980 aa21.74■■□□□ 1.07
SSSCA1-201ENST00000309328 F8W031 263 aaPredicted RBP21.73■■□□□ 1.07
SSSCA1-201ENST00000309328 ZSCAN25Q6NSZ9 544 aa21.73■■□□□ 1.07
SSSCA1-201ENST00000309328 MYH13Q9UKX3 1938 aa21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 ZNF646O15015 1829 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 GOLIM4O00461 696 aa21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 MAP4K4O95819 1239 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 CRKP46108 304 aa21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 PLEKHM2Q8IWE5 1019 aa21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 OTUD7AQ8TE49 926 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 ZDHHC15Q96MV8 337 aa21.72■■□□□ 1.07
SSSCA1-201ENST00000309328 SPDYE2BA6NHP3 402 aa21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 SPDYE6P0CI01 402 aa21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 RBM5P52756 815 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 CFAP100Q494V2 611 aa21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 NSUN4Q96CB9 384 aaKnown RBP21.71■■□□□ 1.07
SSSCA1-201ENST00000309328 KIF3CO14782 793 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 IDH1O75874 414 aaKnown RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 MECOMQ03112 1051 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 TBC1D10BQ4KMP7 808 aaPredicted RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 EAPPQ56P03 285 aaPredicted RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 NAA16Q6N069 864 aaPredicted RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 TBC1D9Q6ZT07 1266 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 ZBED3Q96IU2 234 aaPredicted RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 NOL10Q9BSC4 688 aaKnown RBP21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 PGAP2Q9UHJ9 254 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 GAKO14976 1311 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 PITPNM2Q9BZ72 1349 aa21.7■■□□□ 1.06
SSSCA1-201ENST00000309328 WNT10BO00744 389 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 TOMM70O94826 608 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 GRIK5Q16478 980 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 KBTBD3Q8NAB2 608 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 TRPM4Q8TD43 1214 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 EVI5LQ96CN4 794 aa21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 PIH1D3Q9NQM4 214 aaKnown RBP21.69■■□□□ 1.06
SSSCA1-201ENST00000309328 SHTN1A0MZ66 631 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 BAG3O95817 575 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 ZFYP08048 801 aaPredicted RBP21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 PLCG2P16885 1265 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 RBM26Q5T8P6 1007 aaKnown RBP21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 TSHZ3Q63HK5 1081 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 RBM46Q8TBY0 533 aaKnown RBP21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 MROH7-TTC4A0A0A0MT08 1334 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 AKAP11Q9UKA4 1901 aa21.68■■□□□ 1.06
SSSCA1-201ENST00000309328 TNFAIP1Q13829 316 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 APOBEC3FQ8IUX4 373 aaKnown RBP21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 DCPSQ96C86 337 aaKnown RBP21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 ANTXR1Q9H6X2 564 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 TMOD2Q9NZR1 351 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 CLEC11AQ9Y240 323 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 DAGLAQ9Y4D2 1042 aa21.67■■□□□ 1.06
SSSCA1-201ENST00000309328 HIRAP54198 1017 aaPredicted RBP21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 UBE3CQ15386 1083 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 DIXDC1Q155Q3 683 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 SLC9C2Q5TAH2 1124 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 FKBP1CQ5VVH2 108 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 CHADLQ6NUI6 762 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 SMC1BQ8NDV3 1235 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 NDUFB9Q9Y6M9 179 aa21.66■■□□□ 1.06
SSSCA1-201ENST00000309328 RFX7Q2KHR2 1363 aa21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 GPR75-ASB3A0A0A6YYF3 556 aa21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 PDE4AP27815 886 aa21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 FSTL1Q12841 308 aa21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 APOBEC3HQ6NTF7 200 aaKnown RBP21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 MAGEB6Q8N7X4 407 aa21.65■■□□□ 1.06
SSSCA1-201ENST00000309328 EGFRP00533 1210 aa21.64■■□□□ 1.05
SSSCA1-201ENST00000309328 NBPF9Q3BBW0 867 aa21.64■■□□□ 1.05
SSSCA1-201ENST00000309328 SPDYE2Q495Y8 402 aa21.64■■□□□ 1.05
SSSCA1-201ENST00000309328 SULF1Q8IWU6 871 aa21.64■■□□□ 1.05
SSSCA1-201ENST00000309328 PRMT6Q96LA8 375 aaPredicted RBP21.64■■□□□ 1.05
SSSCA1-201ENST00000309328 PDE6AP16499 860 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 CYP7A1P22680 504 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 PPP4CP60510 307 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 CDC37L1Q7L3B6 337 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 FSD1Q9BTV5 496 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 GGA3Q9NZ52 723 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms