RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RREB1Q92766 1687 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 TULP2O00295 520 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 PHKA1P46020 1223 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 TYRO3Q06418 890 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 ME3Q16798 604 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 ADCK5Q3MIX3 580 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 TTC6Q86TZ1 520 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 TAF6LQ9Y6J9 622 aa12.08□□□□□ -0.48
APOBEC3F-201ENST00000308521 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 KBTBD3Q8NAB2 608 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 CELF1Q92879 486 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 COL4A1P02462 1669 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 HIP1O00291 1037 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 DTNBO60941 627 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 APBA3O96018 575 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 PSMA5P28066 241 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 MCAMP43121 646 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 MMP14P50281 582 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 TXNRD1Q16881 649 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 LARP1BQ659C4 914 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
APOBEC3F-201ENST00000308521 RXRBP28702 533 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 NFIXQ14938 502 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 ANKRD1Q15327 319 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 CHRNDQ07001 517 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 PLA2G4DQ86XP0 818 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
APOBEC3F-201ENST00000308521 SMTNL1A8MU46 457 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 LIG1P18858 919 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 PTGS1P23219 599 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 BCAMP50895 628 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 CREB3L3Q68CJ9 461 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 CAVIN2O95810 425 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 PUM3Q15397 648 aaKnown RBP12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 NLRP3Q96P20 1036 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 TNMDQ9H2S6 317 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 CBX8Q9HC52 389 aa12.05□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZNF75DP51815 510 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 TCEANC2Q96MN5 208 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 EFCC1Q9HA90 598 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 MROH5Q6ZUA9 1318 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 DDX60Q8IY21 1712 aaKnown RBP12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 FGFR2P21802 821 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 CDC25BP30305 580 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 CCDC186Q7Z3E2 898 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 LPIN2Q92539 896 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 SLC27A2O14975 620 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 GYS1P13807 737 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 OSBP2Q969R2 916 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
APOBEC3F-201ENST00000308521 LY75O60449 1722 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 IDH1O75874 414 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 ANO6Q4KMQ2 910 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 GEMIN8Q9NWZ8 242 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 UTRNP46939 3433 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 M0R2C6 588 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 NCBP1Q09161 790 aaKnown RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 AXDND1Q5T1B0 1012 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
APOBEC3F-201ENST00000308521 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms