RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 SNAP23O00161 211 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 TPD52L1Q16890 204 aaPredicted RBP17.61■□□□□ 0.41
CSDC2-201ENST00000306149 MYSM1Q5VVJ2 828 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 ISM2Q6H9L7 571 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 LRRC8AQ8IWT6 810 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 USP27XA6NNY8 438 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 TNNT1P13805 278 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 MARCKSP29966 332 aaPredicted RBP17.61■□□□□ 0.41
CSDC2-201ENST00000306149 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
CSDC2-201ENST00000306149 CYB5R4Q7L1T6 521 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 FBXL16Q8N461 479 aa17.61■□□□□ 0.41
CSDC2-201ENST00000306149 SPTLC2O15270 562 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 CEP57L1Q8IYX8 460 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 ZNF592Q92610 1267 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 DHX16O60231 1041 aaKnown RBP17.6■□□□□ 0.41
CSDC2-201ENST00000306149 STARD3NLO95772 234 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 PHKA1P46020 1223 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 SYNE3Q6ZMZ3 975 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 PHKBQ93100 1093 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 MRFAP1L1Q96HT8 127 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
CSDC2-201ENST00000306149 MAP3K15Q6ZN16 1313 aa17.6■□□□□ 0.41
CSDC2-201ENST00000306149 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 ADD2P35612 726 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 SYCP1Q15431 976 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
CSDC2-201ENST00000306149 PLA2G12BQ9BX93 195 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 B4E1Z4 1266 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 UBE2Q2LH0YL09 131 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
CSDC2-201ENST00000306149 TRDNQ13061 729 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 PDCL2Q8N4E4 241 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 MYL10Q9BUA6 226 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.59■□□□□ 0.41
CSDC2-201ENST00000306149 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 WWC3Q9ULE0 1092 aa17.59■□□□□ 0.41
CSDC2-201ENST00000306149 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.41
CSDC2-201ENST00000306149 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.41
CSDC2-201ENST00000306149 PPP4R3BQ5MIZ7 849 aa17.58■□□□□ 0.41
CSDC2-201ENST00000306149 KIAA1468Q9P260 1216 aa17.58■□□□□ 0.41
CSDC2-201ENST00000306149 PRDM4Q9UKN5 801 aa17.58■□□□□ 0.41
CSDC2-201ENST00000306149 ZNF532Q9HCE3 1301 aa17.58■□□□□ 0.41
CSDC2-201ENST00000306149 MYH7P12883 1935 aa17.58■□□□□ 0.4
CSDC2-201ENST00000306149 CTSWP56202 376 aa17.58■□□□□ 0.4
CSDC2-201ENST00000306149 NAA30Q147X3 362 aaPredicted RBP17.58■□□□□ 0.4
CSDC2-201ENST00000306149 MICU3Q86XE3 530 aa17.58■□□□□ 0.4
CSDC2-201ENST00000306149 TRMT1Q9NXH9 659 aaKnown RBP17.58■□□□□ 0.4
CSDC2-201ENST00000306149 NEMFO60524 1076 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 WDHD1O75717 1129 aaPredicted RBP17.57■□□□□ 0.4
CSDC2-201ENST00000306149 SKILP12757 684 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 SOS2Q07890 1332 aaPredicted RBP17.57■□□□□ 0.4
CSDC2-201ENST00000306149 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
CSDC2-201ENST00000306149 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 A0A1W2PQ27 194 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 A0A1W2PQ64 194 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 A0A1W2PQD8 194 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ZNF202O95125 648 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 CDC27P30260 824 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ANO1Q5XXA6 986 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 KCNG4Q8TDN1 519 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 NEDD4P46934 1319 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
CSDC2-201ENST00000306149 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 ANGEL1Q9UNK9 670 aaKnown RBP17.57■□□□□ 0.4
CSDC2-201ENST00000306149 PAXBP1Q9Y5B6 917 aa17.57■□□□□ 0.4
CSDC2-201ENST00000306149 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
CSDC2-201ENST00000306149 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 AKAP11Q9UKA4 1901 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 PDE8BO95263 885 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 YEATS4O95619 227 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 PFKFB1P16118 471 aa17.56■□□□□ 0.4
CSDC2-201ENST00000306149 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
CSDC2-201ENST00000306149 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
CSDC2-201ENST00000306149 MROH7-TTC4A0A0A0MT08 1334 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
CSDC2-201ENST00000306149 PDE6AP16499 860 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 BRAPQ7Z569 592 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
CSDC2-201ENST00000306149 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
CSDC2-201ENST00000306149 CBX1P83916 185 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
CSDC2-201ENST00000306149 CTDSPL2Q05D32 466 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms