RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 ITGA6P23229 1130 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 NBPF14Q5TI25 921 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 NBPF15Q8N660 670 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 SPATA31D1Q6ZQQ2 1576 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 MED23Q9ULK4 1368 aa20.02■□□□□ 0.79
CHRNA5-201ENST00000299565 IQCB1Q15051 598 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 MAGEB6Q8N7X4 407 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 MRFAP1L1Q96HT8 127 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 APPBP2Q92624 585 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 OGFRQ9NZT2 677 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 STARD3NLO95772 234 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 GTF2F1P35269 517 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 LZTFL1Q9NQ48 299 aa20.01■□□□□ 0.79
CHRNA5-201ENST00000299565 CBFA2T2O43439 604 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 ADKP55263 362 aaKnown RBP20■□□□□ 0.79
CHRNA5-201ENST00000299565 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
CHRNA5-201ENST00000299565 PCMTD1Q96MG8 357 aaPredicted RBP20■□□□□ 0.79
CHRNA5-201ENST00000299565 CARD6Q9BX69 1037 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 ARMT1Q9H993 441 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
CHRNA5-201ENST00000299565 PXDNQ92626 1479 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 ZNF397Q8NF99 534 aaPredicted RBP20■□□□□ 0.79
CHRNA5-201ENST00000299565 FANCLQ9NW38 375 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 HSPA2P54652 639 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 PPFIBP1Q86W92 1011 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 CCDC150Q8NCX0 1101 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 DHX58Q96C10 678 aa20■□□□□ 0.79
CHRNA5-201ENST00000299565 POLR2DO15514 142 aaKnown RBP19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 PRDM1O75626 825 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 GRAMD1CQ8IYS0 662 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 CCDC191Q8NCU4 936 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 DESI2Q9BSY9 194 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 PEAK1Q9H792 1746 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 UBE2Q2LH0YL09 131 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 MBD4O95243 580 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 RFX5P48382 616 aaPredicted RBP19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 NACAP1Q9BZK3 213 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 ZNF532Q9HCE3 1301 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 BTBD18B2RXH4 712 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 MFSD6Q6ZSS7 791 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 ATG9AQ7Z3C6 839 aa19.99■□□□□ 0.79
CHRNA5-201ENST00000299565 EPC1Q9H2F5 836 aa19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 JAG2Q9Y219 1238 aa19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 TPM1P09493 284 aa19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 MYL5Q02045 173 aa19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 CCDC12Q8WUD4 166 aaPredicted RBP19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 KCNH3Q9ULD8 1083 aa19.98■□□□□ 0.79
CHRNA5-201ENST00000299565 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 DHX40Q8IX18 779 aaKnown RBP19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 ST7Q9NRC1 585 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 BRAPQ7Z569 592 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 GREM2Q9H772 168 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 KIF28PB7ZC32 967 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 KIF2AO00139 706 aaPredicted RBP19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 FDPSP14324 419 aaKnown RBP19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 KCNB2Q92953 911 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 SMARCE1Q969G3 411 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 FEZ1Q99689 392 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 CABP5Q9NP86 173 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 COL15A1P39059 1388 aa19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.97■□□□□ 0.79
CHRNA5-201ENST00000299565 CASQ1P31415 396 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 NLRP12P59046 1061 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 FBXO38Q6PIJ6 1188 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 RTEL1Q9NZ71 1219 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 MAPK8IP1Q9UQF2 711 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 SLC4A4Q9Y6R1 1079 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 PHKA1P46020 1223 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 DHX8Q14562 1220 aaKnown RBP19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 ERO1AQ96HE7 468 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 PCDHA5Q9Y5H7 936 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 DIP2AQ14689 1571 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 FOXO4P98177 505 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 DMTNQ08495 405 aa19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 DIS3L2Q8IYB7 885 aaKnown RBP19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 FMR1NBQ8N0W7 255 aaPredicted RBP19.96■□□□□ 0.79
CHRNA5-201ENST00000299565 DIP2BQ9P265 1576 aa19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 PUF60Q9UHX1 559 aaKnown RBP19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 NFE2L3Q9Y4A8 694 aa19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 SENP2Q9HC62 589 aa19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 WTAPQ15007 396 aa19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
CHRNA5-201ENST00000299565 FOXN1O15353 648 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 PPP1R13BQ96KQ4 1090 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 NOL10Q9BSC4 688 aaKnown RBP19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 GTPBP4Q9BZE4 634 aaKnown RBP19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 KIF23Q02241 960 aaPredicted RBP19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 RTN1Q16799 776 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 TSGA10IPQ3SY00 556 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 TMEM232C9JQI7 657 aa19.94■□□□□ 0.78
CHRNA5-201ENST00000299565 H7C1W4 665 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms