RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 ATG9AQ7Z3C6 839 aa18.36■□□□□ 0.53
SMAD6-201ENST00000288840 H7C1W4 665 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 CCDC102BQ68D86 513 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 KRT40Q6A162 431 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 PCMTD1Q96MG8 357 aaPredicted RBP18.35■□□□□ 0.53
SMAD6-201ENST00000288840 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
SMAD6-201ENST00000288840 ANGEL1Q9UNK9 670 aaKnown RBP18.35■□□□□ 0.53
SMAD6-201ENST00000288840 RFX5P48382 616 aaPredicted RBP18.35■□□□□ 0.53
SMAD6-201ENST00000288840 KCNQ4P56696 695 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 ERICH4A6NGS2 130 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 WTAPQ15007 396 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 STAMQ92783 540 aa18.35■□□□□ 0.53
SMAD6-201ENST00000288840 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMAD6-201ENST00000288840 XBP1P17861 261 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 PNOCQ13519 176 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 ELP1O95163 1332 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
SMAD6-201ENST00000288840 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
SMAD6-201ENST00000288840 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
SMAD6-201ENST00000288840 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.53
SMAD6-201ENST00000288840 WWC3Q9ULE0 1092 aa18.33■□□□□ 0.53
SMAD6-201ENST00000288840 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
SMAD6-201ENST00000288840 TRMT44Q8IYL2 757 aaKnown RBP18.33■□□□□ 0.52
SMAD6-201ENST00000288840 REREQ9P2R6 1566 aa18.33■□□□□ 0.52
SMAD6-201ENST00000288840 PFKFB1P16118 471 aa18.33■□□□□ 0.52
SMAD6-201ENST00000288840 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.52
SMAD6-201ENST00000288840 TCHHQ07283 1943 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 RTN1Q16799 776 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
SMAD6-201ENST00000288840 PRKAB2O43741 272 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
SMAD6-201ENST00000288840 HEG1Q9ULI3 1381 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 DHX58Q96C10 678 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
SMAD6-201ENST00000288840 CABP5Q9NP86 173 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 KIAA1468Q9P260 1216 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 RCOR1Q9UKL0 485 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
SMAD6-201ENST00000288840 BCAMP50895 628 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 SDR42E1Q8WUS8 393 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 CAVIN2O95810 425 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 UBXN4Q92575 508 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 BTBD18B2RXH4 712 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 MCAMP43121 646 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 TERF1P54274 439 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
SMAD6-201ENST00000288840 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
SMAD6-201ENST00000288840 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 PDE6AP16499 860 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 ADALQ6DHV7 355 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 PIGBQ92521 554 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMAD6-201ENST00000288840 COBLO75128 1261 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 GNL3LQ9NVN8 582 aaKnown RBP18.3■□□□□ 0.52
SMAD6-201ENST00000288840 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
SMAD6-201ENST00000288840 TPM1P09493 284 aa18.3■□□□□ 0.52
SMAD6-201ENST00000288840 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
SMAD6-201ENST00000288840 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
SMAD6-201ENST00000288840 TEX35Q5T0J7 233 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 GSDMDP57764 484 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
SMAD6-201ENST00000288840 C3P01024 1663 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 MARCH6O60337 910 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 FANCCQ00597 558 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 SKIDA1Q1XH10 827 aa18.29■□□□□ 0.52
SMAD6-201ENST00000288840 ZBTB38Q8NAP3 1195 aaPredicted RBP18.29■□□□□ 0.52
SMAD6-201ENST00000288840 ZNF215Q9UL58 517 aaPredicted RBP18.29■□□□□ 0.52
SMAD6-201ENST00000288840 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
SMAD6-201ENST00000288840 ELF2Q15723 593 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 RABL6Q3YEC7 729 aaPredicted RBP18.28■□□□□ 0.52
SMAD6-201ENST00000288840 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 PPFIBP1Q86W92 1011 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 LINC00301Q8NCQ3 95 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 SMARCE1Q969G3 411 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 PAXBP1Q9Y5B6 917 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 POLR3GO15318 223 aaPredicted RBP18.28■□□□□ 0.52
SMAD6-201ENST00000288840 UQCRFS1P1P0C7P4 283 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 CTSWP56202 376 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 GNG11P61952 73 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 CBFA2T2O43439 604 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 PLIN2Q99541 437 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 KCNH3Q9ULD8 1083 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 MAPK8IP1Q9UQF2 711 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 PXDNLA1KZ92 1463 aa18.28■□□□□ 0.52
SMAD6-201ENST00000288840 GRAMD1CQ8IYS0 662 aa18.27■□□□□ 0.52
SMAD6-201ENST00000288840 SENP2Q9HC62 589 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms