RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 PALD1Q9ULE6 856 aa27.2■■□□□ 1.95
UFD1-201ENST00000263202 LDHBP07195 334 aaKnown RBP27.2■■□□□ 1.94
UFD1-201ENST00000263202 NECTIN1Q15223 517 aa27.2■■□□□ 1.94
UFD1-201ENST00000263202 NAA16Q6N069 864 aaPredicted RBP27.2■■□□□ 1.94
UFD1-201ENST00000263202 TBC1D22AQ8WUA7 517 aa27.2■■□□□ 1.94
UFD1-201ENST00000263202 DSCC1Q9BVC3 393 aa27.2■■□□□ 1.94
UFD1-201ENST00000263202 HSPD1P10809 573 aaKnown RBP27.19■■□□□ 1.94
UFD1-201ENST00000263202 ADGRA1Q86SQ6 560 aa27.19■■□□□ 1.94
UFD1-201ENST00000263202 PPIP5K2O43314 1243 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 ECE2O60344 883 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 GRIK5Q16478 980 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 TMED8Q6PL24 325 aaPredicted RBP27.18■■□□□ 1.94
UFD1-201ENST00000263202 BCS1LQ9Y276 419 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 MYH2Q9UKX2 1941 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 ANAPC15P60006 121 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 MFSD14BQ5SR56 506 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 AIDAQ96BJ3 306 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 PSME4Q14997 1843 aa27.18■■□□□ 1.94
UFD1-201ENST00000263202 FOXP2O15409 715 aa27.17■■□□□ 1.94
UFD1-201ENST00000263202 TTLL5Q6EMB2 1281 aa27.17■■□□□ 1.94
UFD1-201ENST00000263202 IL17RAQ96F46 866 aa27.17■■□□□ 1.94
UFD1-201ENST00000263202 STRBPQ96SI9 672 aaKnown RBP27.17■■□□□ 1.94
UFD1-201ENST00000263202 MBD4O95243 580 aa27.16■■□□□ 1.94
UFD1-201ENST00000263202 DZIP1Q86YF9 867 aaKnown RBP27.16■■□□□ 1.94
UFD1-201ENST00000263202 KCNB2Q92953 911 aa27.16■■□□□ 1.94
UFD1-201ENST00000263202 FHDC1Q9C0D6 1143 aaPredicted RBP27.16■■□□□ 1.94
UFD1-201ENST00000263202 VPS33BQ9H267 617 aa27.16■■□□□ 1.94
UFD1-201ENST00000263202 U3KPZ7 1027 aaPredicted RBP27.16■■□□□ 1.94
UFD1-201ENST00000263202 MIGA1Q8NAN2 632 aa27.16■■□□□ 1.94
UFD1-201ENST00000263202 ZNF277Q9NRM2 450 aaPredicted RBP27.16■■□□□ 1.94
UFD1-201ENST00000263202 FBXW7Q969H0 707 aa27.15■■□□□ 1.94
UFD1-201ENST00000263202 ARMT1Q9H993 441 aa27.15■■□□□ 1.94
UFD1-201ENST00000263202 KCNQ5Q9NR82 932 aa27.15■■□□□ 1.94
UFD1-201ENST00000263202 COL4A5P29400 1685 aa27.14■■□□□ 1.94
UFD1-201ENST00000263202 CREB3L3Q68CJ9 461 aa27.14■■□□□ 1.94
UFD1-201ENST00000263202 RASEFQ8IZ41 740 aa27.14■■□□□ 1.94
UFD1-201ENST00000263202 SNX14Q9Y5W7 946 aa27.14■■□□□ 1.94
UFD1-201ENST00000263202 LCORLQ8N3X6 602 aa27.13■■□□□ 1.93
UFD1-201ENST00000263202 MAGEB6P1A0A0J9YX57 407 aa27.13■■□□□ 1.93
UFD1-201ENST00000263202 SLC27A2O14975 620 aa27.13■■□□□ 1.93
UFD1-201ENST00000263202 CERS5Q8N5B7 392 aa27.13■■□□□ 1.93
UFD1-201ENST00000263202 RIOK1Q9BRS2 568 aaKnown RBP27.13■■□□□ 1.93
UFD1-201ENST00000263202 DDRGK1Q96HY6 314 aa27.12■■□□□ 1.93
UFD1-201ENST00000263202 SUGT1Q9Y2Z0 365 aa27.12■■□□□ 1.93
UFD1-201ENST00000263202 GOLGB1Q14789 3259 aaKnown RBP27.11■■□□□ 1.93
UFD1-201ENST00000263202 NFKBIEO00221 500 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 GSTO1P78417 241 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 RABEP1Q15276 862 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 STRIP1Q5VSL9 837 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 LARGE2Q8N3Y3 721 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 TAOK3Q9H2K8 898 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 YDJCA8MPS7 323 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 IARSP41252 1262 aaKnown RBP27.11■■□□□ 1.93
UFD1-201ENST00000263202 RNF20Q5VTR2 975 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
UFD1-201ENST00000263202 GNAT2P19087 354 aa27.1■■□□□ 1.93
UFD1-201ENST00000263202 FKBP1AP62942 108 aaKnown RBP27.1■■□□□ 1.93
UFD1-201ENST00000263202 DYNLL1P63167 89 aaKnown RBP27.1■■□□□ 1.93
UFD1-201ENST00000263202 DIXDC1Q155Q3 683 aa27.1■■□□□ 1.93
UFD1-201ENST00000263202 LAMA4Q16363 1823 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 USP17L3A6NCW0 530 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 USP17L4A6NCW7 530 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 FGAP02671 866 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 ZKSCAN1P17029 563 aaPredicted RBP27.09■■□□□ 1.93
UFD1-201ENST00000263202 DACT2Q5SW24 774 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 USP17L1Q7RTZ2 530 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 PATL2C9JE40 543 aaKnown RBP27.09■■□□□ 1.93
UFD1-201ENST00000263202 LDHCP07864 332 aa27.09■■□□□ 1.93
UFD1-201ENST00000263202 IPO9Q96P70 1041 aaKnown RBP27.09■■□□□ 1.93
UFD1-201ENST00000263202 MROH7-TTC4A0A0A0MT08 1334 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 CYP21A2P08686 494 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 SYT17Q9BSW7 474 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 LTBP3Q9NS15 1303 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 AATFQ9NY61 560 aaKnown RBP eCLIP27.08■■□□□ 1.93
UFD1-201ENST00000263202 CTNNA3Q9UI47 895 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 SLC4A4Q9Y6R1 1079 aa27.08■■□□□ 1.93
UFD1-201ENST00000263202 GSG1L2A8MUP6 293 aa27.07■■□□□ 1.92
UFD1-201ENST00000263202 PRKAB2O43741 272 aa27.07■■□□□ 1.92
UFD1-201ENST00000263202 APPP05067 770 aa27.07■■□□□ 1.92
UFD1-201ENST00000263202 TSGA10IPQ3SY00 556 aa27.07■■□□□ 1.92
UFD1-201ENST00000263202 TAF6LQ9Y6J9 622 aa27.07■■□□□ 1.92
UFD1-201ENST00000263202 ALX1Q15699 326 aa27.06■■□□□ 1.92
UFD1-201ENST00000263202 RPAP1Q9BWH6 1393 aaPredicted RBP27.06■■□□□ 1.92
UFD1-201ENST00000263202 ADCK5Q3MIX3 580 aa27.06■■□□□ 1.92
UFD1-201ENST00000263202 SLF2Q8IX21 1173 aa27.06■■□□□ 1.92
UFD1-201ENST00000263202 FAM163AQ96GL9 167 aaPredicted RBP27.06■■□□□ 1.92
UFD1-201ENST00000263202 EPB41L4AQ9HCS5 686 aaPredicted RBP27.06■■□□□ 1.92
UFD1-201ENST00000263202 CDK5RAP2Q96SN8 1893 aa27.06■■□□□ 1.92
UFD1-201ENST00000263202 ADAMTSL1Q8N6G6 1762 aa27.05■■□□□ 1.92
UFD1-201ENST00000263202 ZMYM6O95789 1325 aa27.05■■□□□ 1.92
UFD1-201ENST00000263202 NIM1KQ8IY84 436 aa27.05■■□□□ 1.92
UFD1-201ENST00000263202 IFNL3Q8IZI9 196 aa27.05■■□□□ 1.92
UFD1-201ENST00000263202 GAKO14976 1311 aa27.05■■□□□ 1.92
UFD1-201ENST00000263202 F8W031 263 aaPredicted RBP27.04■■□□□ 1.92
UFD1-201ENST00000263202 TTF2Q9UNY4 1162 aaKnown RBP27.04■■□□□ 1.92
UFD1-201ENST00000263202 BAZ2AQ9UIF9 1905 aaKnown RBP27.04■■□□□ 1.92
UFD1-201ENST00000263202 PPP4CP60510 307 aa27.04■■□□□ 1.92
UFD1-201ENST00000263202 ZNRF3Q9ULT6 936 aa27.04■■□□□ 1.92
UFD1-201ENST00000263202 RASSF7Q02833 373 aa27.03■■□□□ 1.92
UFD1-201ENST00000263202 SDR42E1Q8WUS8 393 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms