RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 SH3TC1Q8TE82 1336 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 MYL5Q02045 173 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 VSTM4Q8IW00 320 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 GOLGA1Q92805 767 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 HAUS7Q99871 368 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 H3BQF6 201 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 DHX16O60231 1041 aaKnown RBP17.24■□□□□ 0.35
XRCC1-201ENST00000262887 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 LONRF2Q1L5Z9 754 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 SYNE3Q6ZMZ3 975 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
XRCC1-201ENST00000262887 TNRQ92752 1358 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 LTKP29376 864 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 GTF2A1P52655 376 aaPredicted RBP17.24■□□□□ 0.35
XRCC1-201ENST00000262887 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
XRCC1-201ENST00000262887 CCDC151A5D8V7 595 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 TMEM139Q8IV31 216 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 LOC102724159A0A0B4J2E5 919 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 CLGNO14967 610 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 TXLNAP40222 546 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 PWP2Q15269 919 aaKnown RBP17.23■□□□□ 0.35
XRCC1-201ENST00000262887 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
XRCC1-201ENST00000262887 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
XRCC1-201ENST00000262887 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
XRCC1-201ENST00000262887 A0A0G2JLW4 131 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
XRCC1-201ENST00000262887 CMA1P23946 247 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 BRD3Q15059 726 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 BRAPQ7Z569 592 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 NEURL1BA8MQ27 555 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 MAP2K7O14733 419 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-201ENST00000262887 MROH7-TTC4A0A0A0MT08 1334 aa17.22■□□□□ 0.35
XRCC1-201ENST00000262887 IVLP07476 585 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 GCKRQ14397 625 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
XRCC1-201ENST00000262887 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 GOLGA6L1Q8N7Z2 621 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
XRCC1-201ENST00000262887 SYKP43405 635 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
XRCC1-201ENST00000262887 IP6K1Q92551 441 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 DHX58Q96C10 678 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
XRCC1-201ENST00000262887 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
XRCC1-201ENST00000262887 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
XRCC1-201ENST00000262887 VPS18Q9P253 973 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 GOLIM4O00461 696 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
XRCC1-201ENST00000262887 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 MYO1BO43795 1136 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 HSPD1P10809 573 aaKnown RBP17.2■□□□□ 0.34
XRCC1-201ENST00000262887 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 PDILTQ8N807 584 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 MYD88Q99836 296 aa17.2■□□□□ 0.34
XRCC1-201ENST00000262887 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 STX10O60499 249 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-201ENST00000262887 APPP05067 770 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-201ENST00000262887 PDE11AQ9HCR9 933 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 FANCLQ9NW38 375 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 PNOCQ13519 176 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 ICE2Q659A1 982 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 TOGARAM2Q6ZUX3 1019 aa17.19■□□□□ 0.34
XRCC1-201ENST00000262887 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-201ENST00000262887 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 MYL6BP14649 208 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 HNRNPLLQ8WVV9 542 aaKnown RBP17.18■□□□□ 0.34
XRCC1-201ENST00000262887 LRRC59Q96AG4 307 aaKnown RBP17.18■□□□□ 0.34
XRCC1-201ENST00000262887 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 MCM6Q14566 821 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 PDIA6Q15084 440 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 HDXQ7Z353 690 aa17.18■□□□□ 0.34
XRCC1-201ENST00000262887 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
XRCC1-201ENST00000262887 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 TBX2Q13207 712 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-201ENST00000262887 INTS13Q9NVM9 706 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms