RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 ANKRD7Q92527 254 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 KIF28PB7ZC32 967 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 GIGYF2Q6Y7W6 1299 aaKnown RBP17.73■□□□□ 0.43
DDX56-201ENST00000258772 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 FBXW7Q969H0 707 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
DDX56-201ENST00000258772 ITGA6P23229 1130 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 ADD2P35612 726 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
DDX56-201ENST00000258772 FILIP1Q7Z7B0 1213 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 NBPF3Q9H094 633 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 NEDD4P46934 1319 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 MAP3K15Q6ZN16 1313 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 SKILP12757 684 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 TRDNQ13061 729 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
DDX56-201ENST00000258772 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 ZNF202O95125 648 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 EVA1CP58658 441 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 HLFQ16534 295 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 PDCL2Q8N4E4 241 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 RGS22Q8NE09 1264 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 PIGBQ92521 554 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 GREM2Q9H772 168 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 SOS2Q07890 1332 aaPredicted RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 MYO5AQ9Y4I1 1855 aaKnown RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 STARD3NLO95772 234 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 ZRSR1Q15695 479 aaKnown RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 DPCR1Q3MIW9 517 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 AXDND1Q5T1B0 1012 aaPredicted RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 NLRP10Q86W26 655 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
DDX56-201ENST00000258772 ANGEL1Q9UNK9 670 aaKnown RBP17.71■□□□□ 0.43
DDX56-201ENST00000258772 XIRP1Q702N8 1843 aaKnown RBP17.7■□□□□ 0.42
DDX56-201ENST00000258772 GPTP24298 496 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 CCZ1BP86790 482 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 CCZ1P86791 482 aaPredicted RBP17.7■□□□□ 0.42
DDX56-201ENST00000258772 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
DDX56-201ENST00000258772 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
DDX56-201ENST00000258772 CMA1P23946 247 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 VGLL2Q8N8G2 317 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 NKX2-3Q8TAU0 364 aa17.7■□□□□ 0.42
DDX56-201ENST00000258772 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 USP27XA6NNY8 438 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 SYCP1Q15431 976 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 CYB5R4Q7L1T6 521 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 TBC1D10CQ8IV04 446 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 CTSWP56202 376 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 CCDC112Q8NEF3 446 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 PIH1D3Q9NQM4 214 aaKnown RBP17.69■□□□□ 0.42
DDX56-201ENST00000258772 MYH3P11055 1940 aa17.69■□□□□ 0.42
DDX56-201ENST00000258772 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 APPP05067 770 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 PFKFB1P16118 471 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX56-201ENST00000258772 NLRP12P59046 1061 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 SMAP1Q8IYB5 467 aaPredicted RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 ALG1Q9BT22 464 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 OSBPL5Q9H0X9 879 aaPredicted RBP17.68■□□□□ 0.42
DDX56-201ENST00000258772 ATRNO75882 1429 aa17.68■□□□□ 0.42
DDX56-201ENST00000258772 PDE8BO95263 885 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 GSDMDP57764 484 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 IMPACTQ9P2X3 320 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 BIN1O00499 593 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
DDX56-201ENST00000258772 CDKL5O76039 1030 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 ZNF532Q9HCE3 1301 aa17.67■□□□□ 0.42
DDX56-201ENST00000258772 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
DDX56-201ENST00000258772 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
DDX56-201ENST00000258772 KRT40Q6A162 431 aa17.66■□□□□ 0.42
DDX56-201ENST00000258772 APOA5Q6Q788 366 aa17.66■□□□□ 0.42
DDX56-201ENST00000258772 ZNF592Q92610 1267 aa17.66■□□□□ 0.42
DDX56-201ENST00000258772 KCND1Q9NSA2 647 aa17.66■□□□□ 0.42
DDX56-201ENST00000258772 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms