RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PRDX5P30044 214 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 SCARF1Q14162 830 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 TTLL12Q14166 644 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 IMMTQ16891 758 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 RRP12Q5JTH9 1297 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-201ENST00000237289 UBE3CQ15386 1083 aa13.27□□□□□ -0.28
TNFAIP3-201ENST00000237289 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.28
TNFAIP3-201ENST00000237289 IQCA1LA6NCM1 817 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 IL1R1P14778 569 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 NF2P35240 595 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 MECOMQ03112 1051 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 CXCL9Q07325 125 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 CHMLP26374 656 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 BTDP43251 543 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 TNFAIP1Q13829 316 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 ARMT1Q9H993 441 aa13.27□□□□□ -0.29
TNFAIP3-201ENST00000237289 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 ERICH2A1L162 156 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 RAD21O60216 631 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 CNOT7Q9UIV1 285 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 ZNF213O14771 459 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 GPAA1O43292 621 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 AGBL3Q8NEM8 1001 aa13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 DCPSQ96C86 337 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-201ENST00000237289 NFKBIEO00221 500 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 CRKP46108 304 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 SLC4A8Q2Y0W8 1093 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 TMED8Q6PL24 325 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 C7orf43Q8WVR3 580 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 TBC1D10BQ4KMP7 808 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 RAD50Q92878 1312 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 RREB1Q92766 1687 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 ADD2P35612 726 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
TNFAIP3-201ENST00000237289 PSMA5P28066 241 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 SULF1Q8IWU6 871 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 TCP10Q12799 353 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 TGFBRAP1Q8WUH2 860 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 IGSF3O75054 1194 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
TNFAIP3-201ENST00000237289 BECN1Q14457 450 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 CCDC129Q6ZRS4 1044 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 C22orf23Q9BZE7 217 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 PDE4BQ07343 736 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 DDNO94850 711 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 FAM205AQ6ZU69 1335 aa13.23□□□□□ -0.29
TNFAIP3-201ENST00000237289 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 SLC51AQ86UW1 340 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 GPC2Q8N158 579 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 KCNQ5Q9NR82 932 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 HAND2P61296 217 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 KRT32Q14532 448 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 KIF4BQ2VIQ3 1234 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
TNFAIP3-201ENST00000237289 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
TNFAIP3-201ENST00000237289 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-201ENST00000237289 EP400Q96L91 3159 aa13.21□□□□□ -0.29
TNFAIP3-201ENST00000237289 ST18O60284 1047 aa13.21□□□□□ -0.29
TNFAIP3-201ENST00000237289 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-201ENST00000237289 DYNLL1P63167 89 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 ZNF408Q9H9D4 720 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 CABP5Q9NP86 173 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 A0A0D9SFI3 127 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 DACT2Q5SW24 774 aa13.21□□□□□ -0.3
TNFAIP3-201ENST00000237289 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms